Cluster: MGYG000003377_CGC57
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003377
- CGC Family ID: CGCFAM_03344
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003377_91 | MGYG000003377_91_27 | 27464 | 28372 | + | 3.A.1.15.7 |
| TC | MGYG000003377_91 | MGYG000003377_91_28 | 28376 | 29203 | + | 3.A.1.15.7 |
| TC | MGYG000003377_91 | MGYG000003377_91_29 | 29200 | 30057 | + | 3.A.1.15.7 |
| TC | MGYG000003377_91 | MGYG000003377_91_30 | 30054 | 30899 | + | 3.A.1.15.7 |
| pfam | MGYG000003377_91 | MGYG000003377_91_31 | 31142 | 32080 | + | Dus |
| pfam | MGYG000003377_91 | MGYG000003377_91_32 | 32235 | 33068 | + | PRD | PRD | CAT_RBD |
| TC | MGYG000003377_91 | MGYG000003377_91_33 | 33254 | 35113 | + | 4.A.1.2.2 |
| CAZyme | MGYG000003377_91 | MGYG000003377_91_34 | 35129 | 36523 | + | GH1 |
| sulfatase | MGYG000003377_91 | MGYG000003377_91_35 | 36758 | 37528 | + | S1_4 |
| TC | MGYG000003377_91 | MGYG000003377_91_36 | 37529 | 38113 | - | 9.B.27.2.7 |
| TC | MGYG000003377_91 | MGYG000003377_91_37 | 38262 | 38849 | + | 9.B.29.3.1 |
Gene ID: MGYG000003377_91_27
Type: TC
Location: 27464 - 28372 (+)
Type: TC
Location: 27464 - 28372 (+)
Gene ID: MGYG000003377_91_28
Type: TC
Location: 28376 - 29203 (+)
Type: TC
Location: 28376 - 29203 (+)
Gene ID: MGYG000003377_91_29
Type: TC
Location: 29200 - 30057 (+)
Type: TC
Location: 29200 - 30057 (+)
Gene ID: MGYG000003377_91_30
Type: TC
Location: 30054 - 30899 (+)
Type: TC
Location: 30054 - 30899 (+)
Gene ID: MGYG000003377_91_31
Type: pfam
Location: 31142 - 32080 (+)
Type: pfam
Location: 31142 - 32080 (+)
Gene ID: MGYG000003377_91_32
Type: pfam
Location: 32235 - 33068 (+)
Type: pfam
Location: 32235 - 33068 (+)
Gene ID: MGYG000003377_91_33
Type: TC
Location: 33254 - 35113 (+)
Type: TC
Location: 33254 - 35113 (+)
Gene ID: MGYG000003377_91_34
Type: CAZyme
Location: 35129 - 36523 (+)
Type: CAZyme
Location: 35129 - 36523 (+)
Gene ID: MGYG000003377_91_35
Type: sulfatase
Location: 36758 - 37528 (+)
Type: sulfatase
Location: 36758 - 37528 (+)
Gene ID: MGYG000003377_91_36
Type: TC
Location: 37529 - 38113 (-)
Type: TC
Location: 37529 - 38113 (-)
Gene ID: MGYG000003377_91_37
Type: TC
Location: 38262 - 38849 (+)
Type: TC
Location: 38262 - 38849 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Phytobacter
Species
Phytobacter sp002377245
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000003377_91_29 | vegetarian > omnivore | 1.40896 | 0.03781 |