Cluster: MGYG000003377_CGC55
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003377
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003377_90 | MGYG000003377_90_143 | 145791 | 146765 | + | 9.B.34.1.3 |
| pfam | MGYG000003377_90 | MGYG000003377_90_144 | 146824 | 147114 | - | Rdx |
| TC | MGYG000003377_90 | MGYG000003377_90_145 | 147340 | 149712 | + | 1.B.14.2.7 |
| pfam | MGYG000003377_90 | MGYG000003377_90_146 | 149782 | 150834 | + | HemS | HemS | ChuX_HutX | ChuX_HutX |
| TC | MGYG000003377_90 | MGYG000003377_90_147 | 150831 | 151646 | + | 3.A.1.14.16 |
| TC | MGYG000003377_90 | MGYG000003377_90_148 | 151646 | 152641 | + | 3.A.1.14.5 |
| TC | MGYG000003377_90 | MGYG000003377_90_149 | 152634 | 153413 | + | 3.A.1.14.16 |
| CAZyme | MGYG000003377_90 | MGYG000003377_90_150 | 153460 | 155640 | - | AA2 |
| NULL(UNKNOWN) | MGYG000003377_90 | MGYG000003377_90_151 | 155979 | 156731 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | MGYG000003377_90 | MGYG000003377_90_152 | 157474 | 157929 | + | MarR |
| TC | MGYG000003377_90 | MGYG000003377_90_153 | 157956 | 159146 | + | 8.A.1.1.1 |
| TC | MGYG000003377_90 | MGYG000003377_90_154 | 159157 | 160695 | + | 2.A.1.3.2 |
Gene ID: MGYG000003377_90_143
Type: TC
Location: 145791 - 146765 (+)
Type: TC
Location: 145791 - 146765 (+)
Gene ID: MGYG000003377_90_144
Type: pfam
Location: 146824 - 147114 (-)
Type: pfam
Location: 146824 - 147114 (-)
Gene ID: MGYG000003377_90_145
Type: TC
Location: 147340 - 149712 (+)
Type: TC
Location: 147340 - 149712 (+)
Gene ID: MGYG000003377_90_146
Type: pfam
Location: 149782 - 150834 (+)
Type: pfam
Location: 149782 - 150834 (+)
Gene ID: MGYG000003377_90_147
Type: TC
Location: 150831 - 151646 (+)
Type: TC
Location: 150831 - 151646 (+)
Gene ID: MGYG000003377_90_148
Type: TC
Location: 151646 - 152641 (+)
Type: TC
Location: 151646 - 152641 (+)
Gene ID: MGYG000003377_90_149
Type: TC
Location: 152634 - 153413 (+)
Type: TC
Location: 152634 - 153413 (+)
Gene ID: MGYG000003377_90_150
Type: CAZyme
Location: 153460 - 155640 (-)
Type: CAZyme
Location: 153460 - 155640 (-)
Gene ID: MGYG000003377_90_151
Type:
Location: 155979 - 156731 (-)
Type:
Location: 155979 - 156731 (-)
Gene ID: MGYG000003377_90_152
Type: TF
Location: 157474 - 157929 (+)
Type: TF
Location: 157474 - 157929 (+)
Gene ID: MGYG000003377_90_153
Type: TC
Location: 157956 - 159146 (+)
Type: TC
Location: 157956 - 159146 (+)
Gene ID: MGYG000003377_90_154
Type: TC
Location: 159157 - 160695 (+)
Type: TC
Location: 159157 - 160695 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Phytobacter
Species
Phytobacter sp002377245
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.