Cluster: MGYG000003377_CGC45
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 4
- Substrate:
- Genome ID: MGYG000003377
- CGC Family ID: CGCFAM_00123
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003377_78 | MGYG000003377_78_79 | 85146 | 87593 | - | GT35 |
| CAZyme | MGYG000003377_78 | MGYG000003377_78_80 | 87612 | 89045 | - | GT5 |
| pfam | MGYG000003377_78 | MGYG000003377_78_81 | 89136 | 90422 | - | NTP_transferase | NTP_transf_3 | Hexapep_GlmU |
| CAZyme | MGYG000003377_78 | MGYG000003377_78_82 | 90436 | 92412 | - | CBM48 | GH13_11 |
| CAZyme | MGYG000003377_78 | MGYG000003377_78_83 | 92409 | 94595 | - | CBM48 | GH13_9 |
| pfam | MGYG000003377_78 | MGYG000003377_78_84 | 94858 | 95964 | - | Semialdhyde_dh | Semialdhyde_dhC |
| TC | MGYG000003377_78 | MGYG000003377_78_85 | 96126 | 96719 | + | 2.A.95.1.5 |
| TC | MGYG000003377_78 | MGYG000003377_78_86 | 96888 | 98228 | - | 2.A.8.1.8 |
Gene ID: MGYG000003377_78_79
Type: CAZyme
Location: 85146 - 87593 (-)
Type: CAZyme
Location: 85146 - 87593 (-)
Gene ID: MGYG000003377_78_80
Type: CAZyme
Location: 87612 - 89045 (-)
Type: CAZyme
Location: 87612 - 89045 (-)
Gene ID: MGYG000003377_78_81
Type: pfam
Location: 89136 - 90422 (-)
Type: pfam
Location: 89136 - 90422 (-)
Gene ID: MGYG000003377_78_82
Type: CAZyme
Location: 90436 - 92412 (-)
Type: CAZyme
Location: 90436 - 92412 (-)
Gene ID: MGYG000003377_78_83
Type: CAZyme
Location: 92409 - 94595 (-)
Type: CAZyme
Location: 92409 - 94595 (-)
Gene ID: MGYG000003377_78_84
Type: pfam
Location: 94858 - 95964 (-)
Type: pfam
Location: 94858 - 95964 (-)
Gene ID: MGYG000003377_78_85
Type: TC
Location: 96126 - 96719 (+)
Type: TC
Location: 96126 - 96719 (+)
Gene ID: MGYG000003377_78_86
Type: TC
Location: 96888 - 98228 (-)
Type: TC
Location: 96888 - 98228 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Phytobacter
Species
Phytobacter sp002377245
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000003377_78_81 | vegan > omnivore | 1.66638 | 0.01181 |
| MGYG000003377_78_81 | vegetarian > omnivore | 1.63611 | 0.02288 |