Cluster: MGYG000003377_CGC11
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003377
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003377_19 | MGYG000003377_19_36 | 34323 | 34982 | - | 1.C.113.1.10 |
| pfam | MGYG000003377_19 | MGYG000003377_19_37 | 35145 | 35456 | - | ASCH |
| TF | MGYG000003377_19 | MGYG000003377_19_38 | 35509 | 36237 | + | HTH_6 |
| CAZyme | MGYG000003377_19 | MGYG000003377_19_39 | 36357 | 37790 | + | GH1 |
Gene ID: MGYG000003377_19_36
Type: TC
Location: 34323 - 34982 (-)
Type: TC
Location: 34323 - 34982 (-)
Gene ID: MGYG000003377_19_37
Type: pfam
Location: 35145 - 35456 (-)
Type: pfam
Location: 35145 - 35456 (-)
Gene ID: MGYG000003377_19_38
Type: TF
Location: 35509 - 36237 (+)
Type: TF
Location: 35509 - 36237 (+)
Gene ID: MGYG000003377_19_39
Type: CAZyme
Location: 36357 - 37790 (+)
Type: CAZyme
Location: 36357 - 37790 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Phytobacter
Species
Phytobacter sp002377245
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000003377_19_38 | vegetarian > vegan | 1.75944 | 0.01778 |
| MGYG000003377_19_39 | vegan > omnivore | 1.01823 | 0.00110 |