Cluster: MGYG000003377_CGC1
🧬 Cluster Details
- Gene Count: 17
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003377
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003377_6 | MGYG000003377_6_35 | 33831 | 35198 | + | 4.A.7.1.4 |
| pfam | MGYG000003377_6 | MGYG000003377_6_36 | 35185 | 36027 | + | F_bP_aldolase |
| NULL(UNKNOWN) | MGYG000003377_6 | MGYG000003377_6_37 | 36098 | 36367 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000003377_6 | MGYG000003377_6_38 | 36377 | 36814 | + | 4.A.7.1.1 |
| NULL(UNKNOWN) | MGYG000003377_6 | MGYG000003377_6_39 | 36811 | 37350 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000003377_6 | MGYG000003377_6_40 | 37375 | 37698 | - | 2.A.78.2.3 |
| TC | MGYG000003377_6 | MGYG000003377_6_41 | 37698 | 38360 | - | 2.A.78.2.3 |
| TF | MGYG000003377_6 | MGYG000003377_6_42 | 38465 | 39013 | + | HTH_3 |
| TF | MGYG000003377_6 | MGYG000003377_6_43 | 39085 | 40080 | + | LacI |
| CAZyme | MGYG000003377_6 | MGYG000003377_6_44 | 40195 | 42318 | + | GH36 |
| TC | MGYG000003377_6 | MGYG000003377_6_45 | 42364 | 43626 | + | 2.A.1.5.4 |
| pfam | MGYG000003377_6 | MGYG000003377_6_46 | 43713 | 44027 | - | rhaM |
| pfam | MGYG000003377_6 | MGYG000003377_6_47 | 44024 | 45172 | - | Fe-ADH | Fe-ADH_2 | ADH_Fe_C |
| TC | MGYG000003377_6 | MGYG000003377_6_48 | 45311 | 46315 | - | 3.A.1.2.8 |
| TC | MGYG000003377_6 | MGYG000003377_6_49 | 46312 | 47316 | - | 3.A.1.2.9 |
| TC | MGYG000003377_6 | MGYG000003377_6_50 | 47316 | 48827 | - | 3.A.1.2.9 |
| TC | MGYG000003377_6 | MGYG000003377_6_51 | 48936 | 49922 | - | 3.A.1.2.9 |
Gene ID: MGYG000003377_6_35
Type: TC
Location: 33831 - 35198 (+)
Type: TC
Location: 33831 - 35198 (+)
Gene ID: MGYG000003377_6_36
Type: pfam
Location: 35185 - 36027 (+)
Type: pfam
Location: 35185 - 36027 (+)
Gene ID: MGYG000003377_6_37
Type:
Location: 36098 - 36367 (+)
Type:
Location: 36098 - 36367 (+)
Gene ID: MGYG000003377_6_38
Type: TC
Location: 36377 - 36814 (+)
Type: TC
Location: 36377 - 36814 (+)
Gene ID: MGYG000003377_6_39
Type:
Location: 36811 - 37350 (+)
Type:
Location: 36811 - 37350 (+)
Gene ID: MGYG000003377_6_40
Type: TC
Location: 37375 - 37698 (-)
Type: TC
Location: 37375 - 37698 (-)
Gene ID: MGYG000003377_6_41
Type: TC
Location: 37698 - 38360 (-)
Type: TC
Location: 37698 - 38360 (-)
Gene ID: MGYG000003377_6_42
Type: TF
Location: 38465 - 39013 (+)
Type: TF
Location: 38465 - 39013 (+)
Gene ID: MGYG000003377_6_43
Type: TF
Location: 39085 - 40080 (+)
Type: TF
Location: 39085 - 40080 (+)
Gene ID: MGYG000003377_6_44
Type: CAZyme
Location: 40195 - 42318 (+)
Type: CAZyme
Location: 40195 - 42318 (+)
Gene ID: MGYG000003377_6_45
Type: TC
Location: 42364 - 43626 (+)
Type: TC
Location: 42364 - 43626 (+)
Gene ID: MGYG000003377_6_46
Type: pfam
Location: 43713 - 44027 (-)
Type: pfam
Location: 43713 - 44027 (-)
Gene ID: MGYG000003377_6_47
Type: pfam
Location: 44024 - 45172 (-)
Type: pfam
Location: 44024 - 45172 (-)
Gene ID: MGYG000003377_6_48
Type: TC
Location: 45311 - 46315 (-)
Type: TC
Location: 45311 - 46315 (-)
Gene ID: MGYG000003377_6_49
Type: TC
Location: 46312 - 47316 (-)
Type: TC
Location: 46312 - 47316 (-)
Gene ID: MGYG000003377_6_50
Type: TC
Location: 47316 - 48827 (-)
Type: TC
Location: 47316 - 48827 (-)
Gene ID: MGYG000003377_6_51
Type: TC
Location: 48936 - 49922 (-)
Type: TC
Location: 48936 - 49922 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Phytobacter
Species
Phytobacter sp002377245
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000003377_6_46 | vegetarian > omnivore | 2.21120 | 0.03781 |
| MGYG000003377_6_46 | vegetarian > vegan | 2.24957 | 0.01778 |
| MGYG000003377_6_47 | vegetarian > omnivore | 1.78748 | 0.01604 |
| MGYG000003377_6_47 | vegetarian > vegan | 1.21637 | 0.01778 |
| MGYG000003377_6_48 | vegetarian > vegan | 1.84886 | 0.01778 |
| MGYG000003377_6_50 | vegetarian > vegan | 1.56117 | 0.01778 |
| MGYG000003377_6_51 | vegetarian > vegan | 1.01241 | 0.01778 |