Cluster: MGYG000003365.1_CGC5
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003365.1
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003365.1_5 | MGYG000003365.1_5_155 | 172274 | 173962 | - | 9.B.33.1.1 |
| TF | MGYG000003365.1_5 | MGYG000003365.1_5_156 | 174180 | 174911 | + | MerR |
| NULL(UNKNOWN) | MGYG000003365.1_5 | MGYG000003365.1_5_157 | 174970 | 175077 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000003365.1_5 | MGYG000003365.1_5_158 | 175058 | 175789 | - | 3.A.1.12.15 |
| TC | MGYG000003365.1_5 | MGYG000003365.1_5_159 | 175773 | 176720 | - | 3.A.1.12.15 |
| TC | MGYG000003365.1_5 | MGYG000003365.1_5_160 | 176717 | 177871 | - | 3.A.1.12.15 |
| TC | MGYG000003365.1_5 | MGYG000003365.1_5_161 | 177893 | 178810 | - | 3.A.1.12.15 |
| CAZyme | MGYG000003365.1_5 | MGYG000003365.1_5_162 | 178899 | 181196 | - | GH3 |
Gene ID: MGYG000003365.1_5_155
Type: TC
Location: 172274 - 173962 (-)
Type: TC
Location: 172274 - 173962 (-)
Gene ID: MGYG000003365.1_5_156
Type: TF
Location: 174180 - 174911 (+)
Type: TF
Location: 174180 - 174911 (+)
Gene ID: MGYG000003365.1_5_157
Type:
Location: 174970 - 175077 (+)
Type:
Location: 174970 - 175077 (+)
Gene ID: MGYG000003365.1_5_158
Type: TC
Location: 175058 - 175789 (-)
Type: TC
Location: 175058 - 175789 (-)
Gene ID: MGYG000003365.1_5_159
Type: TC
Location: 175773 - 176720 (-)
Type: TC
Location: 175773 - 176720 (-)
Gene ID: MGYG000003365.1_5_160
Type: TC
Location: 176717 - 177871 (-)
Type: TC
Location: 176717 - 177871 (-)
Gene ID: MGYG000003365.1_5_161
Type: TC
Location: 177893 - 178810 (-)
Type: TC
Location: 177893 - 178810 (-)
Gene ID: MGYG000003365.1_5_162
Type: CAZyme
Location: 178899 - 181196 (-)
Type: CAZyme
Location: 178899 - 181196 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Pseudescherichia
Species
Pseudescherichia sp002298805
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000003365.1_5_161 | vegetarian > omnivore | 1.77873 | 0.02745 |