Cluster: MGYG000003365.1_CGC31
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000003365.1
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003365.1_37 | MGYG000003365.1_37_172 | 189067 | 190074 | - | GH8 |
| pfam | MGYG000003365.1_37 | MGYG000003365.1_37_173 | 190095 | 190577 | - | Cellsynth_D |
| TC | MGYG000003365.1_37 | MGYG000003365.1_37_174 | 190577 | 194557 | - | 1.B.55.3.1 |
| TC | MGYG000003365.1_37 | MGYG000003365.1_37_175 | 194572 | 196863 | - | 4.D.3.1.6 |
| CAZyme | MGYG000003365.1_37 | MGYG000003365.1_37_176 | 196860 | 198968 | - | GT2 |
| STP | MGYG000003365.1_37 | MGYG000003365.1_37_177 | 198987 | 199790 | - | CbiA |
| NULL(UNKNOWN) | MGYG000003365.1_37 | MGYG000003365.1_37_178 | 199781 | 200317 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000003365.1_37 | MGYG000003365.1_37_179 | 200824 | 201840 | - | 3.A.1.5.27 |
| TC | MGYG000003365.1_37 | MGYG000003365.1_37_180 | 201827 | 202819 | - | 3.A.1.5.27 |
| TC | MGYG000003365.1_37 | MGYG000003365.1_37_181 | 202831 | 203733 | - | 3.A.1.5.39 |
| TC | MGYG000003365.1_37 | MGYG000003365.1_37_182 | 203743 | 204762 | - | 3.A.1.5.39 |
| TC | MGYG000003365.1_37 | MGYG000003365.1_37_183 | 204905 | 206512 | - | 3.A.1.5.27 |
Gene ID: MGYG000003365.1_37_172
Type: CAZyme
Location: 189067 - 190074 (-)
Type: CAZyme
Location: 189067 - 190074 (-)
Gene ID: MGYG000003365.1_37_173
Type: pfam
Location: 190095 - 190577 (-)
Type: pfam
Location: 190095 - 190577 (-)
Gene ID: MGYG000003365.1_37_174
Type: TC
Location: 190577 - 194557 (-)
Type: TC
Location: 190577 - 194557 (-)
Gene ID: MGYG000003365.1_37_175
Type: TC
Location: 194572 - 196863 (-)
Type: TC
Location: 194572 - 196863 (-)
Gene ID: MGYG000003365.1_37_176
Type: CAZyme
Location: 196860 - 198968 (-)
Type: CAZyme
Location: 196860 - 198968 (-)
Gene ID: MGYG000003365.1_37_177
Type: STP
Location: 198987 - 199790 (-)
Type: STP
Location: 198987 - 199790 (-)
Gene ID: MGYG000003365.1_37_178
Type:
Location: 199781 - 200317 (-)
Type:
Location: 199781 - 200317 (-)
Gene ID: MGYG000003365.1_37_179
Type: TC
Location: 200824 - 201840 (-)
Type: TC
Location: 200824 - 201840 (-)
Gene ID: MGYG000003365.1_37_180
Type: TC
Location: 201827 - 202819 (-)
Type: TC
Location: 201827 - 202819 (-)
Gene ID: MGYG000003365.1_37_181
Type: TC
Location: 202831 - 203733 (-)
Type: TC
Location: 202831 - 203733 (-)
Gene ID: MGYG000003365.1_37_182
Type: TC
Location: 203743 - 204762 (-)
Type: TC
Location: 203743 - 204762 (-)
Gene ID: MGYG000003365.1_37_183
Type: TC
Location: 204905 - 206512 (-)
Type: TC
Location: 204905 - 206512 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Pseudescherichia
Species
Pseudescherichia sp002298805
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.