Cluster: MGYG000003365.1_CGC30
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000003365.1
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003365.1_37 | MGYG000003365.1_37_160 | 169621 | 170907 | - | 2.A.23.1.7 |
| STP | MGYG000003365.1_37 | MGYG000003365.1_37_161 | 171064 | 173070 | - | EAL | GGDEF |
| TC | MGYG000003365.1_37 | MGYG000003365.1_37_162 | 173184 | 176741 | - | 1.B.55.3.1 |
| CAZyme | MGYG000003365.1_37 | MGYG000003365.1_37_163 | 176729 | 177832 | - | GH8 |
| TC | MGYG000003365.1_37 | MGYG000003365.1_37_164 | 177836 | 180160 | - | 4.D.3.1.6 |
| CAZyme | MGYG000003365.1_37 | MGYG000003365.1_37_165 | 180213 | 182831 | - | GT2 |
Gene ID: MGYG000003365.1_37_160
Type: TC
Location: 169621 - 170907 (-)
Type: TC
Location: 169621 - 170907 (-)
Gene ID: MGYG000003365.1_37_161
Type: STP
Location: 171064 - 173070 (-)
Type: STP
Location: 171064 - 173070 (-)
Gene ID: MGYG000003365.1_37_162
Type: TC
Location: 173184 - 176741 (-)
Type: TC
Location: 173184 - 176741 (-)
Gene ID: MGYG000003365.1_37_163
Type: CAZyme
Location: 176729 - 177832 (-)
Type: CAZyme
Location: 176729 - 177832 (-)
Gene ID: MGYG000003365.1_37_164
Type: TC
Location: 177836 - 180160 (-)
Type: TC
Location: 177836 - 180160 (-)
Gene ID: MGYG000003365.1_37_165
Type: CAZyme
Location: 180213 - 182831 (-)
Type: CAZyme
Location: 180213 - 182831 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Pseudescherichia
Species
Pseudescherichia sp002298805
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.