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Cluster: MGYG000003365.1_CGC29

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000003365.1_37 MGYG000003365.1_37_74 68982 70298 + 2.A.8.1.4
CAZyme MGYG000003365.1_37 MGYG000003365.1_37_75 70337 72424 - GH77
CAZyme MGYG000003365.1_37 MGYG000003365.1_37_76 72433 74826 - GT35
TF MGYG000003365.1_37 MGYG000003365.1_37_77 75462 78167 + GerE
TF MGYG000003365.1_37 MGYG000003365.1_37_78 78208 78966 - HTH_DeoR
TC MGYG000003365.1_37 MGYG000003365.1_37_79 78985 79800 - 9.B.104.1.1
STP MGYG000003365.1_37 MGYG000003365.1_37_80 79866 80195 - Rhodanese
pfam MGYG000003365.1_37 MGYG000003365.1_37_81 80389 81894 + DAO | DAO_C
CAZyme MGYG000003365.1_37 MGYG000003365.1_37_82 81976 84423 - GT35
CAZyme MGYG000003365.1_37 MGYG000003365.1_37_83 84443 85876 - GT5
pfam MGYG000003365.1_37 MGYG000003365.1_37_84 85969 87252 - NTP_transferase | NTP_transf_3 | Hexapep_GlmU
CAZyme MGYG000003365.1_37 MGYG000003365.1_37_85 87268 89244 - CBM48 | GH13_11
CAZyme MGYG000003365.1_37 MGYG000003365.1_37_86 89241 91427 - CBM48 | GH13_9
pfam MGYG000003365.1_37 MGYG000003365.1_37_87 91654 92760 - Semialdhyde_dh | Semialdhyde_dhC
TC MGYG000003365.1_37 MGYG000003365.1_37_88 92937 93530 + 2.A.95.1.5
TC MGYG000003365.1_37 MGYG000003365.1_37_89 93599 94939 - 2.A.8.1.8
Gene ID: MGYG000003365.1_37_74
Type: TC
Location: 68982 - 70298 (+)
Gene ID: MGYG000003365.1_37_75
Type: CAZyme
Location: 70337 - 72424 (-)
Gene ID: MGYG000003365.1_37_76
Type: CAZyme
Location: 72433 - 74826 (-)
Gene ID: MGYG000003365.1_37_77
Type: TF
Location: 75462 - 78167 (+)
Gene ID: MGYG000003365.1_37_78
Type: TF
Location: 78208 - 78966 (-)
Gene ID: MGYG000003365.1_37_79
Type: TC
Location: 78985 - 79800 (-)
Gene ID: MGYG000003365.1_37_80
Type: STP
Location: 79866 - 80195 (-)
Gene ID: MGYG000003365.1_37_81
Type: pfam
Location: 80389 - 81894 (+)
Gene ID: MGYG000003365.1_37_82
Type: CAZyme
Location: 81976 - 84423 (-)
Gene ID: MGYG000003365.1_37_83
Type: CAZyme
Location: 84443 - 85876 (-)
Gene ID: MGYG000003365.1_37_84
Type: pfam
Location: 85969 - 87252 (-)
Gene ID: MGYG000003365.1_37_85
Type: CAZyme
Location: 87268 - 89244 (-)
Gene ID: MGYG000003365.1_37_86
Type: CAZyme
Location: 89241 - 91427 (-)
Gene ID: MGYG000003365.1_37_87
Type: pfam
Location: 91654 - 92760 (-)
Gene ID: MGYG000003365.1_37_88
Type: TC
Location: 92937 - 93530 (+)
Gene ID: MGYG000003365.1_37_89
Type: TC
Location: 93599 - 94939 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000003365.1_37_80 vegetarian > omnivore 2.28092 0.02745
MGYG000003365.1_37_80 vegetarian > vegan 1.96948 0.03510

🧭 Explore Read Mapping of CGC

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