Cluster: MGYG000003365.1_CGC2
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000003365.1
- CGC Family ID: CGCFAM_01553
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003365.1_5 | MGYG000003365.1_5_72 | 78594 | 79691 | - | GT4 |
| CAZyme | MGYG000003365.1_5 | MGYG000003365.1_5_73 | 79734 | 80609 | - | GT2 |
| sulfatase | MGYG000003365.1_5 | MGYG000003365.1_5_74 | 80639 | 81724 | - | S1_7 |
| NULL(UNKNOWN) | MGYG000003365.1_5 | MGYG000003365.1_5_75 | 81721 | 82884 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000003365.1_5 | MGYG000003365.1_5_76 | 82881 | 84020 | - | 2.A.66.2.1 |
Gene ID: MGYG000003365.1_5_72
Type: CAZyme
Location: 78594 - 79691 (-)
Type: CAZyme
Location: 78594 - 79691 (-)
Gene ID: MGYG000003365.1_5_73
Type: CAZyme
Location: 79734 - 80609 (-)
Type: CAZyme
Location: 79734 - 80609 (-)
Gene ID: MGYG000003365.1_5_74
Type: sulfatase
Location: 80639 - 81724 (-)
Type: sulfatase
Location: 80639 - 81724 (-)
Gene ID: MGYG000003365.1_5_75
Type:
Location: 81721 - 82884 (-)
Type:
Location: 81721 - 82884 (-)
Gene ID: MGYG000003365.1_5_76
Type: TC
Location: 82881 - 84020 (-)
Type: TC
Location: 82881 - 84020 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Pseudescherichia
Species
Pseudescherichia sp002298805
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.