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Cluster: MGYG000003365.1_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000003365.1_17 MGYG000003365.1_17_165 172000 174207 + 1.B.14.1.15
TC MGYG000003365.1_17 MGYG000003365.1_17_166 174316 175710 + 2.A.3.1.1
TC MGYG000003365.1_17 MGYG000003365.1_17_167 175877 177118 + 2.A.1.10.4
pfam MGYG000003365.1_17 MGYG000003365.1_17_168 177133 178197 + AP_endonuc_2
CAZyme MGYG000003365.1_17 MGYG000003365.1_17_169 178194 179345 + GH179
TF MGYG000003365.1_17 MGYG000003365.1_17_170 179435 180415 + LacI
TC MGYG000003365.1_17 MGYG000003365.1_17_171 180418 181845 - 2.A.1.3.38
Gene ID: MGYG000003365.1_17_165
Type: TC
Location: 172000 - 174207 (+)
Gene ID: MGYG000003365.1_17_166
Type: TC
Location: 174316 - 175710 (+)
Gene ID: MGYG000003365.1_17_167
Type: TC
Location: 175877 - 177118 (+)
Gene ID: MGYG000003365.1_17_168
Type: pfam
Location: 177133 - 178197 (+)
Gene ID: MGYG000003365.1_17_169
Type: CAZyme
Location: 178194 - 179345 (+)
Gene ID: MGYG000003365.1_17_170
Type: TF
Location: 179435 - 180415 (+)
Gene ID: MGYG000003365.1_17_171
Type: TC
Location: 180418 - 181845 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000003365.1_17_169 vegetarian > vegan 1.90877 0.03764

🧭 Explore Read Mapping of CGC

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