Cluster: MGYG000003365.1_CGC11
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003365.1
- CGC Family ID: CGCFAM_09788
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003365.1_17 | MGYG000003365.1_17_71 | 74568 | 75182 | + | 2.A.115.2.6 |
| TF | MGYG000003365.1_17 | MGYG000003365.1_17_72 | 75257 | 76240 | + | LacI |
| CAZyme | MGYG000003365.1_17 | MGYG000003365.1_17_73 | 76359 | 79433 | + | GH2 |
| STP | MGYG000003365.1_17 | MGYG000003365.1_17_74 | 79414 | 80997 | - | EAL |
| TC | MGYG000003365.1_17 | MGYG000003365.1_17_75 | 81120 | 81788 | - | 3.A.1.24.5 |
| TC | MGYG000003365.1_17 | MGYG000003365.1_17_76 | 81776 | 82564 | - | 3.A.1.24.1 |
| TC | MGYG000003365.1_17 | MGYG000003365.1_17_77 | 82561 | 83370 | - | 3.A.1.24.5 |
Gene ID: MGYG000003365.1_17_71
Type: TC
Location: 74568 - 75182 (+)
Type: TC
Location: 74568 - 75182 (+)
Gene ID: MGYG000003365.1_17_72
Type: TF
Location: 75257 - 76240 (+)
Type: TF
Location: 75257 - 76240 (+)
Gene ID: MGYG000003365.1_17_73
Type: CAZyme
Location: 76359 - 79433 (+)
Type: CAZyme
Location: 76359 - 79433 (+)
Gene ID: MGYG000003365.1_17_74
Type: STP
Location: 79414 - 80997 (-)
Type: STP
Location: 79414 - 80997 (-)
Gene ID: MGYG000003365.1_17_75
Type: TC
Location: 81120 - 81788 (-)
Type: TC
Location: 81120 - 81788 (-)
Gene ID: MGYG000003365.1_17_76
Type: TC
Location: 81776 - 82564 (-)
Type: TC
Location: 81776 - 82564 (-)
Gene ID: MGYG000003365.1_17_77
Type: TC
Location: 82561 - 83370 (-)
Type: TC
Location: 82561 - 83370 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Pseudescherichia
Species
Pseudescherichia sp002298805
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.