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Cluster: MGYG000003360_CGC78

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000003360_75 MGYG000003360_75_50 46534 47682 + 3.A.6.2.1
TC MGYG000003360_75 MGYG000003360_75_51 47675 49753 + 1.A.104.1.1
pfam MGYG000003360_75 MGYG000003360_75_52 49753 50145 + FlhE
TC MGYG000003360_75 MGYG000003360_75_53 50419 52005 + 2.A.2.5.2
CAZyme MGYG000003360_75 MGYG000003360_75_54 52006 53145 + GH105
pfam MGYG000003360_75 MGYG000003360_75_55 53259 54992 - tRNA-synt_1d | Arg_tRNA_synt_N | DALR_1
pfam MGYG000003360_75 MGYG000003360_75_56 55235 55798 + YecM
TC MGYG000003360_75 MGYG000003360_75_57 55822 56568 + 9.B.158.1.2
Gene ID: MGYG000003360_75_50
Type: TC
Location: 46534 - 47682 (+)
Gene ID: MGYG000003360_75_51
Type: TC
Location: 47675 - 49753 (+)
Gene ID: MGYG000003360_75_52
Type: pfam
Location: 49753 - 50145 (+)
Gene ID: MGYG000003360_75_53
Type: TC
Location: 50419 - 52005 (+)
Gene ID: MGYG000003360_75_54
Type: CAZyme
Location: 52006 - 53145 (+)
Gene ID: MGYG000003360_75_55
Type: pfam
Location: 53259 - 54992 (-)
Gene ID: MGYG000003360_75_56
Type: pfam
Location: 55235 - 55798 (+)
Gene ID: MGYG000003360_75_57
Type: TC
Location: 55822 - 56568 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000003360_75_53 vegetarian > omnivore 2.08080 0.02003
MGYG000003360_75_53 vegetarian > vegan 1.47268 0.03018

🧭 Explore Read Mapping of CGC

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