Cluster: MGYG000003360_CGC59
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000003360
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003360_48 | MGYG000003360_48_92 | 95122 | 95955 | + | 2.A.7.31.3 |
| TC | MGYG000003360_48 | MGYG000003360_48_93 | 96133 | 97317 | + | 2.A.1.2.9 |
| CAZyme | MGYG000003360_48 | MGYG000003360_48_94 | 97220 | 98365 | - | GH5_25 |
| STP | MGYG000003360_48 | MGYG000003360_48_95 | 98418 | 99737 | + | PALP |
| pfam | MGYG000003360_48 | MGYG000003360_48_96 | 99745 | 100107 | - | DUF202 |
| TC | MGYG000003360_48 | MGYG000003360_48_97 | 100097 | 100444 | - | 9.B.51.1.1 |
| CAZyme | MGYG000003360_48 | MGYG000003360_48_98 | 100581 | 101903 | - | GH4 |
| TC | MGYG000003360_48 | MGYG000003360_48_99 | 101900 | 103516 | - | 4.A.1.1.10 |
| TF | MGYG000003360_48 | MGYG000003360_48_100 | 103738 | 104472 | + | GntR |
| TC | MGYG000003360_48 | MGYG000003360_48_101 | 104452 | 106113 | - | 2.A.81.1.5 |
Gene ID: MGYG000003360_48_92
Type: TC
Location: 95122 - 95955 (+)
Type: TC
Location: 95122 - 95955 (+)
Gene ID: MGYG000003360_48_93
Type: TC
Location: 96133 - 97317 (+)
Type: TC
Location: 96133 - 97317 (+)
Gene ID: MGYG000003360_48_94
Type: CAZyme
Location: 97220 - 98365 (-)
Type: CAZyme
Location: 97220 - 98365 (-)
Gene ID: MGYG000003360_48_95
Type: STP
Location: 98418 - 99737 (+)
Type: STP
Location: 98418 - 99737 (+)
Gene ID: MGYG000003360_48_96
Type: pfam
Location: 99745 - 100107 (-)
Type: pfam
Location: 99745 - 100107 (-)
Gene ID: MGYG000003360_48_97
Type: TC
Location: 100097 - 100444 (-)
Type: TC
Location: 100097 - 100444 (-)
Gene ID: MGYG000003360_48_98
Type: CAZyme
Location: 100581 - 101903 (-)
Type: CAZyme
Location: 100581 - 101903 (-)
Gene ID: MGYG000003360_48_99
Type: TC
Location: 101900 - 103516 (-)
Type: TC
Location: 101900 - 103516 (-)
Gene ID: MGYG000003360_48_100
Type: TF
Location: 103738 - 104472 (+)
Type: TF
Location: 103738 - 104472 (+)
Gene ID: MGYG000003360_48_101
Type: TC
Location: 104452 - 106113 (-)
Type: TC
Location: 104452 - 106113 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Enterobacter_D
Species
Enterobacter_D kobei_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000003360_48_93 | vegetarian > vegan | 1.02886 | 0.03815 |
| MGYG000003360_48_98 | vegetarian > omnivore | 1.10169 | 0.04734 |