Cluster: MGYG000003360_CGC52
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003360
- CGC Family ID: CGCFAM_00434
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003360_45 | MGYG000003360_45_132 | 153714 | 154604 | + | 3.A.1.1.11 |
| TC | MGYG000003360_45 | MGYG000003360_45_133 | 154597 | 155499 | + | 3.A.1.1.11 |
| TC | MGYG000003360_45 | MGYG000003360_45_134 | 155512 | 156639 | + | 3.A.1.1.11 |
| TC | MGYG000003360_45 | MGYG000003360_45_135 | 156654 | 157943 | + | 3.A.1.1.11 |
| pfam | MGYG000003360_45 | MGYG000003360_45_136 | 158086 | 158847 | - | adh_short | adh_short_C2 |
| pfam | MGYG000003360_45 | MGYG000003360_45_137 | 158910 | 159746 | - | KduI |
| CAZyme | MGYG000003360_45 | MGYG000003360_45_138 | 160107 | 161282 | + | PL22 | PL22 |
| TC | MGYG000003360_45 | MGYG000003360_45_139 | 161465 | 162145 | - | 1.B.35.1.5 |
| pfam | MGYG000003360_45 | MGYG000003360_45_140 | 162654 | 163832 | - | Thiolase_N | ketoacyl-synt | Thiolase_C |
| TC | MGYG000003360_45 | MGYG000003360_45_141 | 163989 | 164801 | - | 3.A.1.24.2 |
| TC | MGYG000003360_45 | MGYG000003360_45_142 | 164829 | 165497 | - | 3.A.1.24.2 |
| TC | MGYG000003360_45 | MGYG000003360_45_143 | 165490 | 166512 | - | 3.A.1.24.2 |
Gene ID: MGYG000003360_45_132
Type: TC
Location: 153714 - 154604 (+)
Type: TC
Location: 153714 - 154604 (+)
Gene ID: MGYG000003360_45_133
Type: TC
Location: 154597 - 155499 (+)
Type: TC
Location: 154597 - 155499 (+)
Gene ID: MGYG000003360_45_134
Type: TC
Location: 155512 - 156639 (+)
Type: TC
Location: 155512 - 156639 (+)
Gene ID: MGYG000003360_45_135
Type: TC
Location: 156654 - 157943 (+)
Type: TC
Location: 156654 - 157943 (+)
Gene ID: MGYG000003360_45_136
Type: pfam
Location: 158086 - 158847 (-)
Type: pfam
Location: 158086 - 158847 (-)
Gene ID: MGYG000003360_45_137
Type: pfam
Location: 158910 - 159746 (-)
Type: pfam
Location: 158910 - 159746 (-)
Gene ID: MGYG000003360_45_138
Type: CAZyme
Location: 160107 - 161282 (+)
Type: CAZyme
Location: 160107 - 161282 (+)
Gene ID: MGYG000003360_45_139
Type: TC
Location: 161465 - 162145 (-)
Type: TC
Location: 161465 - 162145 (-)
Gene ID: MGYG000003360_45_140
Type: pfam
Location: 162654 - 163832 (-)
Type: pfam
Location: 162654 - 163832 (-)
Gene ID: MGYG000003360_45_141
Type: TC
Location: 163989 - 164801 (-)
Type: TC
Location: 163989 - 164801 (-)
Gene ID: MGYG000003360_45_142
Type: TC
Location: 164829 - 165497 (-)
Type: TC
Location: 164829 - 165497 (-)
Gene ID: MGYG000003360_45_143
Type: TC
Location: 165490 - 166512 (-)
Type: TC
Location: 165490 - 166512 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Enterobacter_D
Species
Enterobacter_D kobei_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000003360_45_132 | vegetarian > vegan | 1.16602 | 0.03111 |
| MGYG000003360_45_135 | vegetarian > omnivore | 2.17465 | 0.02003 |
| MGYG000003360_45_135 | vegetarian > vegan | 1.01997 | 0.03815 |
| MGYG000003360_45_138 | vegetarian > omnivore | 2.34272 | 0.02971 |
| MGYG000003360_45_138 | vegetarian > vegan | 1.93715 | 0.03018 |