Cluster: MGYG000003360_CGC39
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003360
- CGC Family ID: CGCFAM_00236
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003360_42 | MGYG000003360_42_152 | 154635 | 156059 | + | 2.A.1.3.38 |
| pfam | MGYG000003360_42 | MGYG000003360_42_153 | 156062 | 156925 | - | EamA | EamA |
| TF | MGYG000003360_42 | MGYG000003360_42_154 | 156946 | 157926 | - | LacI |
| CAZyme | MGYG000003360_42 | MGYG000003360_42_155 | 158009 | 159160 | - | GH109 |
| pfam | MGYG000003360_42 | MGYG000003360_42_156 | 159157 | 160221 | - | AP_endonuc_2 |
| TC | MGYG000003360_42 | MGYG000003360_42_157 | 160237 | 161478 | - | 2.A.1.10.4 |
| TC | MGYG000003360_42 | MGYG000003360_42_158 | 161638 | 163008 | - | 2.A.3.1.1 |
| TC | MGYG000003360_42 | MGYG000003360_42_159 | 163114 | 165300 | - | 1.B.14.1.15 |
Gene ID: MGYG000003360_42_152
Type: TC
Location: 154635 - 156059 (+)
Type: TC
Location: 154635 - 156059 (+)
Gene ID: MGYG000003360_42_153
Type: pfam
Location: 156062 - 156925 (-)
Type: pfam
Location: 156062 - 156925 (-)
Gene ID: MGYG000003360_42_154
Type: TF
Location: 156946 - 157926 (-)
Type: TF
Location: 156946 - 157926 (-)
Gene ID: MGYG000003360_42_155
Type: CAZyme
Location: 158009 - 159160 (-)
Type: CAZyme
Location: 158009 - 159160 (-)
Gene ID: MGYG000003360_42_156
Type: pfam
Location: 159157 - 160221 (-)
Type: pfam
Location: 159157 - 160221 (-)
Gene ID: MGYG000003360_42_157
Type: TC
Location: 160237 - 161478 (-)
Type: TC
Location: 160237 - 161478 (-)
Gene ID: MGYG000003360_42_158
Type: TC
Location: 161638 - 163008 (-)
Type: TC
Location: 161638 - 163008 (-)
Gene ID: MGYG000003360_42_159
Type: TC
Location: 163114 - 165300 (-)
Type: TC
Location: 163114 - 165300 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Enterobacter_D
Species
Enterobacter_D kobei_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000003360_42_152 | vegetarian > omnivore | 2.05929 | 0.03645 |
| MGYG000003360_42_157 | vegetarian > vegan | 1.20331 | 0.03815 |