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Cluster: MGYG000003360_CGC31

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000003360_34 MGYG000003360_34_134 158981 160309 - GH4
TC MGYG000003360_34 MGYG000003360_34_135 160318 161922 - 4.A.1.1.3
TF MGYG000003360_34 MGYG000003360_34_136 162051 162785 - GntR
TC MGYG000003360_34 MGYG000003360_34_137 162879 164219 - 1.I.1.1.3
STP MGYG000003360_34 MGYG000003360_34_138 164449 165126 + TetR_N
TC MGYG000003360_34 MGYG000003360_34_139 165123 166118 + 3.A.1.105.15
TC MGYG000003360_34 MGYG000003360_34_140 166111 167847 + 3.A.1.105.15
TC MGYG000003360_34 MGYG000003360_34_141 167840 168973 + 3.A.1.105.15
TC MGYG000003360_34 MGYG000003360_34_142 169164 170270 + 3.A.1.105.15
TC MGYG000003360_34 MGYG000003360_34_143 170232 170642 - 9.B.15.1.1
pfam MGYG000003360_34 MGYG000003360_34_144 170776 171537 + Exo_endo_phos
pfam MGYG000003360_34 MGYG000003360_34_145 171534 172781 + PLDc | PLDc_2 | PLDc_2
TC MGYG000003360_34 MGYG000003360_34_146 172781 173743 + 4.D.2.4.3
TC MGYG000003360_34 MGYG000003360_34_147 173831 174535 - 1.A.14.2.2
Gene ID: MGYG000003360_34_134
Type: CAZyme
Location: 158981 - 160309 (-)
Gene ID: MGYG000003360_34_135
Type: TC
Location: 160318 - 161922 (-)
Gene ID: MGYG000003360_34_136
Type: TF
Location: 162051 - 162785 (-)
Gene ID: MGYG000003360_34_137
Type: TC
Location: 162879 - 164219 (-)
Gene ID: MGYG000003360_34_138
Type: STP
Location: 164449 - 165126 (+)
Gene ID: MGYG000003360_34_139
Type: TC
Location: 165123 - 166118 (+)
Gene ID: MGYG000003360_34_140
Type: TC
Location: 166111 - 167847 (+)
Gene ID: MGYG000003360_34_141
Type: TC
Location: 167840 - 168973 (+)
Gene ID: MGYG000003360_34_142
Type: TC
Location: 169164 - 170270 (+)
Gene ID: MGYG000003360_34_143
Type: TC
Location: 170232 - 170642 (-)
Gene ID: MGYG000003360_34_144
Type: pfam
Location: 170776 - 171537 (+)
Gene ID: MGYG000003360_34_145
Type: pfam
Location: 171534 - 172781 (+)
Gene ID: MGYG000003360_34_146
Type: TC
Location: 172781 - 173743 (+)
Gene ID: MGYG000003360_34_147
Type: TC
Location: 173831 - 174535 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000003360_34_140 vegetarian > vegan 1.19748 0.01047
MGYG000003360_34_146 vegetarian > omnivore 1.35080 0.03491
MGYG000003360_34_146 vegetarian > vegan 2.94368 0.01385

🧭 Explore Read Mapping of CGC

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