Cluster: MGYG000003360_CGC29
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003360
- CGC Family ID: CGCFAM_07314
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003360_34 | MGYG000003360_34_104 | 122581 | 123903 | - | 4.A.3.2.9 |
| CAZyme | MGYG000003360_34 | MGYG000003360_34_105 | 123953 | 125332 | - | GH1 |
| TC | MGYG000003360_34 | MGYG000003360_34_106 | 125695 | 126741 | - | 3.A.1.20.2 |
| TC | MGYG000003360_34 | MGYG000003360_34_107 | 126746 | 128824 | - | 3.A.1.20.2 |
| TC | MGYG000003360_34 | MGYG000003360_34_108 | 128900 | 129931 | - | 3.A.1.20.2 |
| TC | MGYG000003360_34 | MGYG000003360_34_109 | 129928 | 131232 | - | 2.A.1.4.4 |
| STP | MGYG000003360_34 | MGYG000003360_34_110 | 131317 | 132861 | - | HATPase_c | MASE1 |
| TF | MGYG000003360_34 | MGYG000003360_34_111 | 132861 | 133490 | - | GerE |
| TC | MGYG000003360_34 | MGYG000003360_34_112 | 133594 | 134634 | - | 8.A.5.1.3 |
| TC | MGYG000003360_34 | MGYG000003360_34_113 | 134743 | 136269 | - | 1.B.17.3.8 |
| TC | MGYG000003360_34 | MGYG000003360_34_114 | 136271 | 137842 | - | 2.A.1.3.2 |
| TC | MGYG000003360_34 | MGYG000003360_34_115 | 137839 | 138969 | - | 8.A.1.1.1 |
| TC | MGYG000003360_34 | MGYG000003360_34_116 | 139071 | 140180 | - | 2.A.45.2.5 |
Gene ID: MGYG000003360_34_104
Type: TC
Location: 122581 - 123903 (-)
Type: TC
Location: 122581 - 123903 (-)
Gene ID: MGYG000003360_34_105
Type: CAZyme
Location: 123953 - 125332 (-)
Type: CAZyme
Location: 123953 - 125332 (-)
Gene ID: MGYG000003360_34_106
Type: TC
Location: 125695 - 126741 (-)
Type: TC
Location: 125695 - 126741 (-)
Gene ID: MGYG000003360_34_107
Type: TC
Location: 126746 - 128824 (-)
Type: TC
Location: 126746 - 128824 (-)
Gene ID: MGYG000003360_34_108
Type: TC
Location: 128900 - 129931 (-)
Type: TC
Location: 128900 - 129931 (-)
Gene ID: MGYG000003360_34_109
Type: TC
Location: 129928 - 131232 (-)
Type: TC
Location: 129928 - 131232 (-)
Gene ID: MGYG000003360_34_110
Type: STP
Location: 131317 - 132861 (-)
Type: STP
Location: 131317 - 132861 (-)
Gene ID: MGYG000003360_34_111
Type: TF
Location: 132861 - 133490 (-)
Type: TF
Location: 132861 - 133490 (-)
Gene ID: MGYG000003360_34_112
Type: TC
Location: 133594 - 134634 (-)
Type: TC
Location: 133594 - 134634 (-)
Gene ID: MGYG000003360_34_113
Type: TC
Location: 134743 - 136269 (-)
Type: TC
Location: 134743 - 136269 (-)
Gene ID: MGYG000003360_34_114
Type: TC
Location: 136271 - 137842 (-)
Type: TC
Location: 136271 - 137842 (-)
Gene ID: MGYG000003360_34_115
Type: TC
Location: 137839 - 138969 (-)
Type: TC
Location: 137839 - 138969 (-)
Gene ID: MGYG000003360_34_116
Type: TC
Location: 139071 - 140180 (-)
Type: TC
Location: 139071 - 140180 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Enterobacter_D
Species
Enterobacter_D kobei_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000003360_34_104 | vegetarian > vegan | 2.02596 | 0.03815 |
| MGYG000003360_34_113 | vegetarian > omnivore | 2.19644 | 0.03432 |
| MGYG000003360_34_113 | vegetarian > vegan | 1.99889 | 0.03018 |
| MGYG000003360_34_114 | vegetarian > vegan | 1.49458 | 0.03815 |