Cluster: MGYG000003360_CGC28
🧬 Cluster Details
- Gene Count: 17
- CAZyme Count: 5
- Substrate:
- Genome ID: MGYG000003360
- CGC Family ID: CGCFAM_00785
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003360_34 | MGYG000003360_34_72 | 82645 | 83946 | + | 2.A.1.14.2 |
| CAZyme | MGYG000003360_34 | MGYG000003360_34_73 | 83965 | 86331 | + | GH31_2 |
| NULL(UNKNOWN) | MGYG000003360_34 | MGYG000003360_34_74 | 86376 | 88979 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000003360_34 | MGYG000003360_34_75 | 89300 | 91396 | + | CBM66 |
| TF | MGYG000003360_34 | MGYG000003360_34_76 | 91563 | 92555 | + | LacI |
| TC | MGYG000003360_34 | MGYG000003360_34_77 | 92607 | 93518 | - | 1.B.21.1.1 |
| TC | MGYG000003360_34 | MGYG000003360_34_78 | 93596 | 94675 | - | 3.A.1.1.46 |
| pfam | MGYG000003360_34 | MGYG000003360_34_79 | 94686 | 95354 | - | Hydrolase | HAD_2 |
| CAZyme | MGYG000003360_34 | MGYG000003360_34_80 | 95359 | 97629 | - | GH65 |
| CAZyme | MGYG000003360_34 | MGYG000003360_34_81 | 97626 | 98681 | - | GH179 |
| pfam | MGYG000003360_34 | MGYG000003360_34_82 | 98695 | 99483 | - | AP_endonuc_2 |
| pfam | MGYG000003360_34 | MGYG000003360_34_83 | 99502 | 100554 | - | ADH_zinc_N |
| TC | MGYG000003360_34 | MGYG000003360_34_84 | 100583 | 101425 | - | 3.A.1.1.46 |
| TC | MGYG000003360_34 | MGYG000003360_34_85 | 101412 | 102263 | - | 3.A.1.1.46 |
| TC | MGYG000003360_34 | MGYG000003360_34_86 | 102316 | 103605 | - | 3.A.1.1.46 |
| CAZyme | MGYG000003360_34 | MGYG000003360_34_87 | 103617 | 105299 | - | GH13_18 |
| TC | MGYG000003360_34 | MGYG000003360_34_88 | 105569 | 107161 | - | 3.A.1.121.4 |
Gene ID: MGYG000003360_34_72
Type: TC
Location: 82645 - 83946 (+)
Type: TC
Location: 82645 - 83946 (+)
Gene ID: MGYG000003360_34_73
Type: CAZyme
Location: 83965 - 86331 (+)
Type: CAZyme
Location: 83965 - 86331 (+)
Gene ID: MGYG000003360_34_74
Type:
Location: 86376 - 88979 (-)
Type:
Location: 86376 - 88979 (-)
Gene ID: MGYG000003360_34_75
Type: CAZyme
Location: 89300 - 91396 (+)
Type: CAZyme
Location: 89300 - 91396 (+)
Gene ID: MGYG000003360_34_76
Type: TF
Location: 91563 - 92555 (+)
Type: TF
Location: 91563 - 92555 (+)
Gene ID: MGYG000003360_34_77
Type: TC
Location: 92607 - 93518 (-)
Type: TC
Location: 92607 - 93518 (-)
Gene ID: MGYG000003360_34_78
Type: TC
Location: 93596 - 94675 (-)
Type: TC
Location: 93596 - 94675 (-)
Gene ID: MGYG000003360_34_79
Type: pfam
Location: 94686 - 95354 (-)
Type: pfam
Location: 94686 - 95354 (-)
Gene ID: MGYG000003360_34_80
Type: CAZyme
Location: 95359 - 97629 (-)
Type: CAZyme
Location: 95359 - 97629 (-)
Gene ID: MGYG000003360_34_81
Type: CAZyme
Location: 97626 - 98681 (-)
Type: CAZyme
Location: 97626 - 98681 (-)
Gene ID: MGYG000003360_34_82
Type: pfam
Location: 98695 - 99483 (-)
Type: pfam
Location: 98695 - 99483 (-)
Gene ID: MGYG000003360_34_83
Type: pfam
Location: 99502 - 100554 (-)
Type: pfam
Location: 99502 - 100554 (-)
Gene ID: MGYG000003360_34_84
Type: TC
Location: 100583 - 101425 (-)
Type: TC
Location: 100583 - 101425 (-)
Gene ID: MGYG000003360_34_85
Type: TC
Location: 101412 - 102263 (-)
Type: TC
Location: 101412 - 102263 (-)
Gene ID: MGYG000003360_34_86
Type: TC
Location: 102316 - 103605 (-)
Type: TC
Location: 102316 - 103605 (-)
Gene ID: MGYG000003360_34_87
Type: CAZyme
Location: 103617 - 105299 (-)
Type: CAZyme
Location: 103617 - 105299 (-)
Gene ID: MGYG000003360_34_88
Type: TC
Location: 105569 - 107161 (-)
Type: TC
Location: 105569 - 107161 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Enterobacter_D
Species
Enterobacter_D kobei_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.