Cluster: MGYG000003360_CGC27
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate: galactan
- Genome ID: MGYG000003360
- CGC Family ID: CGCFAM_00933
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003360_33 | MGYG000003360_33_51 | 53997 | 55442 | - | 4.A.2.1.25 |
| TC | MGYG000003360_33 | MGYG000003360_33_52 | 55453 | 55899 | - | 4.A.2.1.25 |
| TC | MGYG000003360_33 | MGYG000003360_33_53 | 56448 | 57848 | + | 1.B.15.1.1 |
| TF | MGYG000003360_33 | MGYG000003360_33_54 | 57975 | 58970 | + | LacI |
| CAZyme | MGYG000003360_33 | MGYG000003360_33_55 | 59084 | 61207 | + | GH36 |
| TC | MGYG000003360_33 | MGYG000003360_33_56 | 61249 | 62514 | + | 2.A.1.5.4 |
Gene ID: MGYG000003360_33_51
Type: TC
Location: 53997 - 55442 (-)
Type: TC
Location: 53997 - 55442 (-)
Gene ID: MGYG000003360_33_52
Type: TC
Location: 55453 - 55899 (-)
Type: TC
Location: 55453 - 55899 (-)
Gene ID: MGYG000003360_33_53
Type: TC
Location: 56448 - 57848 (+)
Type: TC
Location: 56448 - 57848 (+)
Gene ID: MGYG000003360_33_54
Type: TF
Location: 57975 - 58970 (+)
Type: TF
Location: 57975 - 58970 (+)
Gene ID: MGYG000003360_33_55
Type: CAZyme
Location: 59084 - 61207 (+)
Type: CAZyme
Location: 59084 - 61207 (+)
Gene ID: MGYG000003360_33_56
Type: TC
Location: 61249 - 62514 (+)
Type: TC
Location: 61249 - 62514 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Enterobacter_D
Species
Enterobacter_D kobei_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000003360_33_56 | vegetarian > omnivore | 3.39809 | 0.02003 |
| MGYG000003360_33_56 | vegetarian > vegan | 1.08182 | 0.03815 |