Cluster: MGYG000003360_CGC25
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 3
- Substrate:
- Genome ID: MGYG000003360
- CGC Family ID: CGCFAM_10946
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003360_32 | MGYG000003360_32_60 | 57791 | 59716 | + | 1.B.52.2.2 |
| pfam | MGYG000003360_32 | MGYG000003360_32_61 | 59713 | 61332 | - | Acyl-CoA_dh_1 | Acyl-CoA_dh_M | AidB_N |
| CAZyme | MGYG000003360_32 | MGYG000003360_32_62 | 61643 | 63373 | + | GH13_10 |
| CAZyme | MGYG000003360_32 | MGYG000003360_32_63 | 63370 | 65889 | + | GH13_26 |
| CAZyme | MGYG000003360_32 | MGYG000003360_32_64 | 65905 | 67980 | + | CBM48 | GH13_11 |
| pfam | MGYG000003360_32 | MGYG000003360_32_65 | 68044 | 68775 | - | SpoU_methylase | SpoU_sub_bind |
| TC | MGYG000003360_32 | MGYG000003360_32_66 | 68852 | 69661 | - | 3.A.1.5.11 |
| TC | MGYG000003360_32 | MGYG000003360_32_67 | 69658 | 70653 | - | 3.A.1.5.37 |
| TC | MGYG000003360_32 | MGYG000003360_32_68 | 70646 | 71497 | - | 3.A.1.5.11 |
| TC | MGYG000003360_32 | MGYG000003360_32_69 | 71494 | 72453 | - | 3.A.1.5.11 |
| TC | MGYG000003360_32 | MGYG000003360_32_70 | 72466 | 74025 | - | 3.A.1.5.4 |
| peptidase | MGYG000003360_32 | MGYG000003360_32_71 | 74049 | 75266 | - | M20.UPD |
| TC | MGYG000003360_32 | MGYG000003360_32_72 | 75303 | 76082 | - | 3.A.1.16.1 |
| TC | MGYG000003360_32 | MGYG000003360_32_73 | 76082 | 76852 | - | 3.A.1.17.4 |
Gene ID: MGYG000003360_32_60
Type: TC
Location: 57791 - 59716 (+)
Type: TC
Location: 57791 - 59716 (+)
Gene ID: MGYG000003360_32_61
Type: pfam
Location: 59713 - 61332 (-)
Type: pfam
Location: 59713 - 61332 (-)
Gene ID: MGYG000003360_32_62
Type: CAZyme
Location: 61643 - 63373 (+)
Type: CAZyme
Location: 61643 - 63373 (+)
Gene ID: MGYG000003360_32_63
Type: CAZyme
Location: 63370 - 65889 (+)
Type: CAZyme
Location: 63370 - 65889 (+)
Gene ID: MGYG000003360_32_64
Type: CAZyme
Location: 65905 - 67980 (+)
Type: CAZyme
Location: 65905 - 67980 (+)
Gene ID: MGYG000003360_32_65
Type: pfam
Location: 68044 - 68775 (-)
Type: pfam
Location: 68044 - 68775 (-)
Gene ID: MGYG000003360_32_66
Type: TC
Location: 68852 - 69661 (-)
Type: TC
Location: 68852 - 69661 (-)
Gene ID: MGYG000003360_32_67
Type: TC
Location: 69658 - 70653 (-)
Type: TC
Location: 69658 - 70653 (-)
Gene ID: MGYG000003360_32_68
Type: TC
Location: 70646 - 71497 (-)
Type: TC
Location: 70646 - 71497 (-)
Gene ID: MGYG000003360_32_69
Type: TC
Location: 71494 - 72453 (-)
Type: TC
Location: 71494 - 72453 (-)
Gene ID: MGYG000003360_32_70
Type: TC
Location: 72466 - 74025 (-)
Type: TC
Location: 72466 - 74025 (-)
Gene ID: MGYG000003360_32_71
Type: peptidase
Location: 74049 - 75266 (-)
Type: peptidase
Location: 74049 - 75266 (-)
Gene ID: MGYG000003360_32_72
Type: TC
Location: 75303 - 76082 (-)
Type: TC
Location: 75303 - 76082 (-)
Gene ID: MGYG000003360_32_73
Type: TC
Location: 76082 - 76852 (-)
Type: TC
Location: 76082 - 76852 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Enterobacter_D
Species
Enterobacter_D kobei_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.