Cluster: MGYG000003358_CGC50
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003358
- CGC Family ID: CGCFAM_00627
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003358_144 | MGYG000003358_144_1 | 3 | 695 | + | 3.A.2.1.1 |
| TC | MGYG000003358_144 | MGYG000003358_144_2 | 716 | 1135 | + | 3.A.2.1.1 |
| CAZyme | MGYG000003358_144 | MGYG000003358_144_3 | 1654 | 3831 | - | PL9_1 |
| pfam | MGYG000003358_144 | MGYG000003358_144_4 | 4176 | 5546 | + | Hexapep | Hexapep | NTP_transferase | IspD | NTP_transf_3 | Hexapep_2 |
| STP | MGYG000003358_144 | MGYG000003358_144_5 | 5735 | 7564 | + | SIS | SIS |
| TC | MGYG000003358_144 | MGYG000003358_144_6 | 7860 | 8900 | + | 3.A.1.7.1 |
| TC | MGYG000003358_144 | MGYG000003358_144_7 | 8974 | 9933 | + | 3.A.1.7.1 |
| TC | MGYG000003358_144 | MGYG000003358_144_8 | 9933 | 10823 | + | 3.A.1.7.1 |
| TC | MGYG000003358_144 | MGYG000003358_144_9 | 10875 | 11648 | + | 3.A.1.7.1 |
| pfam | MGYG000003358_144 | MGYG000003358_144_10 | 11662 | 12387 | + | PhoU | PhoU |
| pfam | MGYG000003358_144 | MGYG000003358_144_11 | 12499 | 13164 | - | Hydrolase | HAD_2 |
| TC | MGYG000003358_144 | MGYG000003358_144_12 | 13334 | 14671 | + | 2.A.40.7.6 |
Gene ID: MGYG000003358_144_1
Type: TC
Location: 3 - 695 (+)
Type: TC
Location: 3 - 695 (+)
Gene ID: MGYG000003358_144_2
Type: TC
Location: 716 - 1135 (+)
Type: TC
Location: 716 - 1135 (+)
Gene ID: MGYG000003358_144_3
Type: CAZyme
Location: 1654 - 3831 (-)
Type: CAZyme
Location: 1654 - 3831 (-)
Gene ID: MGYG000003358_144_4
Type: pfam
Location: 4176 - 5546 (+)
Type: pfam
Location: 4176 - 5546 (+)
Gene ID: MGYG000003358_144_5
Type: STP
Location: 5735 - 7564 (+)
Type: STP
Location: 5735 - 7564 (+)
Gene ID: MGYG000003358_144_6
Type: TC
Location: 7860 - 8900 (+)
Type: TC
Location: 7860 - 8900 (+)
Gene ID: MGYG000003358_144_7
Type: TC
Location: 8974 - 9933 (+)
Type: TC
Location: 8974 - 9933 (+)
Gene ID: MGYG000003358_144_8
Type: TC
Location: 9933 - 10823 (+)
Type: TC
Location: 9933 - 10823 (+)
Gene ID: MGYG000003358_144_9
Type: TC
Location: 10875 - 11648 (+)
Type: TC
Location: 10875 - 11648 (+)
Gene ID: MGYG000003358_144_10
Type: pfam
Location: 11662 - 12387 (+)
Type: pfam
Location: 11662 - 12387 (+)
Gene ID: MGYG000003358_144_11
Type: pfam
Location: 12499 - 13164 (-)
Type: pfam
Location: 12499 - 13164 (-)
Gene ID: MGYG000003358_144_12
Type: TC
Location: 13334 - 14671 (+)
Type: TC
Location: 13334 - 14671 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Kluyvera
Species
Kluyvera ascorbata
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.