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Cluster: MGYG000003358_CGC40

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000003358_114 MGYG000003358_114_53 54660 56696 - GH13_19
CAZyme MGYG000003358_114 MGYG000003358_114_54 57288 57857 + GH73
TF MGYG000003358_114 MGYG000003358_114_55 57924 59108 - HTH_AraC | HTH_AraC
TC MGYG000003358_114 MGYG000003358_114_56 59179 60360 - 3.A.1.2.4
TC MGYG000003358_114 MGYG000003358_114_57 60338 61936 - 3.A.1.2.4
TC MGYG000003358_114 MGYG000003358_114_58 61937 62929 - 3.A.1.2.4
NULL(UNKNOWN) MGYG000003358_114 MGYG000003358_114_59 63288 64610 + NULL(UNKNOWN)
[View Structural Homologs]
pfam MGYG000003358_114 MGYG000003358_114_60 64692 66146 + FGGY_N | FGGY_C
TC MGYG000003358_114 MGYG000003358_114_61 66314 66691 + 9.B.44.1.1
TC MGYG000003358_114 MGYG000003358_114_62 66656 67651 - 9.B.97.1.1
Gene ID: MGYG000003358_114_53
Type: CAZyme
Location: 54660 - 56696 (-)
Gene ID: MGYG000003358_114_54
Type: CAZyme
Location: 57288 - 57857 (+)
Gene ID: MGYG000003358_114_55
Type: TF
Location: 57924 - 59108 (-)
Gene ID: MGYG000003358_114_56
Type: TC
Location: 59179 - 60360 (-)
Gene ID: MGYG000003358_114_57
Type: TC
Location: 60338 - 61936 (-)
Gene ID: MGYG000003358_114_58
Type: TC
Location: 61937 - 62929 (-)
Gene ID: MGYG000003358_114_59
Type:
Location: 63288 - 64610 (+)
Gene ID: MGYG000003358_114_60
Type: pfam
Location: 64692 - 66146 (+)
Gene ID: MGYG000003358_114_61
Type: TC
Location: 66314 - 66691 (+)
Gene ID: MGYG000003358_114_62
Type: TC
Location: 66656 - 67651 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000003358_114_56 vegan > omnivore 1.01546 0.02891

🧭 Explore Read Mapping of CGC

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