Cluster: MGYG000003358_CGC14
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 4
- Substrate:
- Genome ID: MGYG000003358
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003358_36 | MGYG000003358_36_26 | 24265 | 25605 | + | 2.A.8.1.8 |
| TC | MGYG000003358_36 | MGYG000003358_36_27 | 25647 | 26240 | - | 2.A.95.1.5 |
| pfam | MGYG000003358_36 | MGYG000003358_36_28 | 26474 | 27580 | + | Semialdhyde_dh | Semialdhyde_dhC |
| CAZyme | MGYG000003358_36 | MGYG000003358_36_29 | 27833 | 30019 | + | CBM48 | GH13_9 |
| CAZyme | MGYG000003358_36 | MGYG000003358_36_30 | 30022 | 31998 | + | CBM48 | GH13_11 |
| pfam | MGYG000003358_36 | MGYG000003358_36_31 | 32080 | 33375 | + | NTP_transferase | NTP_transf_3 | Hexapep_GlmU |
| CAZyme | MGYG000003358_36 | MGYG000003358_36_32 | 33375 | 34808 | + | GT5 |
| CAZyme | MGYG000003358_36 | MGYG000003358_36_33 | 34826 | 37273 | + | GT35 |
| pfam | MGYG000003358_36 | MGYG000003358_36_34 | 37324 | 38832 | - | DAO | DAO_C |
| STP | MGYG000003358_36 | MGYG000003358_36_35 | 39034 | 39369 | + | Rhodanese |
| TC | MGYG000003358_36 | MGYG000003358_36_36 | 39491 | 40321 | + | 9.B.104.1.1 |
Gene ID: MGYG000003358_36_26
Type: TC
Location: 24265 - 25605 (+)
Type: TC
Location: 24265 - 25605 (+)
Gene ID: MGYG000003358_36_27
Type: TC
Location: 25647 - 26240 (-)
Type: TC
Location: 25647 - 26240 (-)
Gene ID: MGYG000003358_36_28
Type: pfam
Location: 26474 - 27580 (+)
Type: pfam
Location: 26474 - 27580 (+)
Gene ID: MGYG000003358_36_29
Type: CAZyme
Location: 27833 - 30019 (+)
Type: CAZyme
Location: 27833 - 30019 (+)
Gene ID: MGYG000003358_36_30
Type: CAZyme
Location: 30022 - 31998 (+)
Type: CAZyme
Location: 30022 - 31998 (+)
Gene ID: MGYG000003358_36_31
Type: pfam
Location: 32080 - 33375 (+)
Type: pfam
Location: 32080 - 33375 (+)
Gene ID: MGYG000003358_36_32
Type: CAZyme
Location: 33375 - 34808 (+)
Type: CAZyme
Location: 33375 - 34808 (+)
Gene ID: MGYG000003358_36_33
Type: CAZyme
Location: 34826 - 37273 (+)
Type: CAZyme
Location: 34826 - 37273 (+)
Gene ID: MGYG000003358_36_34
Type: pfam
Location: 37324 - 38832 (-)
Type: pfam
Location: 37324 - 38832 (-)
Gene ID: MGYG000003358_36_35
Type: STP
Location: 39034 - 39369 (+)
Type: STP
Location: 39034 - 39369 (+)
Gene ID: MGYG000003358_36_36
Type: TC
Location: 39491 - 40321 (+)
Type: TC
Location: 39491 - 40321 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Kluyvera
Species
Kluyvera ascorbata
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000003358_36_35 | vegetarian > omnivore | 1.05623 | 0.04337 |