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Cluster: MGYG000003358_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000003358_29 MGYG000003358_29_10 10341 10661 + 4.A.3.2.7
TC MGYG000003358_29 MGYG000003358_29_11 10746 12104 + 4.A.3.2.7
TC MGYG000003358_29 MGYG000003358_29_12 12159 12506 + 4.A.3.2.7
TF MGYG000003358_29 MGYG000003358_29_13 12532 13356 + HTH_AraC | HTH_AraC
CAZyme MGYG000003358_29 MGYG000003358_29_14 13462 14808 + GH4
pfam MGYG000003358_29 MGYG000003358_29_15 14820 15575 + YdjC
pfam MGYG000003358_29 MGYG000003358_29_16 15715 15954 + CedA
TC MGYG000003358_29 MGYG000003358_29_17 16079 17470 - 2.A.23.1.8
Gene ID: MGYG000003358_29_10
Type: TC
Location: 10341 - 10661 (+)
Gene ID: MGYG000003358_29_11
Type: TC
Location: 10746 - 12104 (+)
Gene ID: MGYG000003358_29_12
Type: TC
Location: 12159 - 12506 (+)
Gene ID: MGYG000003358_29_13
Type: TF
Location: 12532 - 13356 (+)
Gene ID: MGYG000003358_29_14
Type: CAZyme
Location: 13462 - 14808 (+)
Gene ID: MGYG000003358_29_15
Type: pfam
Location: 14820 - 15575 (+)
Gene ID: MGYG000003358_29_16
Type: pfam
Location: 15715 - 15954 (+)
Gene ID: MGYG000003358_29_17
Type: TC
Location: 16079 - 17470 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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