Cluster: MGYG000003358_CGC12
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003358
- CGC Family ID: CGCFAM_00236
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003358_28 | MGYG000003358_28_19 | 18070 | 19497 | + | 2.A.1.3.38 |
| TC | MGYG000003358_28 | MGYG000003358_28_20 | 19576 | 20820 | + | 1.A.23.4.5 |
| TF | MGYG000003358_28 | MGYG000003358_28_21 | 20821 | 21720 | - | HTH_1 |
| peptidase | MGYG000003358_28 | MGYG000003358_28_22 | 21854 | 22660 | + | S33.UNW |
| TC | MGYG000003358_28 | MGYG000003358_28_23 | 22657 | 23553 | + | 2.A.7.23.1 |
| TF | MGYG000003358_28 | MGYG000003358_28_24 | 23652 | 24632 | - | LacI |
| CAZyme | MGYG000003358_28 | MGYG000003358_28_25 | 24708 | 25859 | - | GH179 |
| pfam | MGYG000003358_28 | MGYG000003358_28_26 | 25856 | 26884 | - | AP_endonuc_2 |
| TC | MGYG000003358_28 | MGYG000003358_28_27 | 26905 | 28146 | - | 2.A.1.10.4 |
| pfam | MGYG000003358_28 | MGYG000003358_28_28 | 28277 | 29221 | + | AP_endonuc_2 |
| TC | MGYG000003358_28 | MGYG000003358_28_29 | 29298 | 30689 | - | 2.A.3.1.1 |
| TC | MGYG000003358_28 | MGYG000003358_28_30 | 30834 | 33026 | - | 1.B.14.1.15 |
Gene ID: MGYG000003358_28_19
Type: TC
Location: 18070 - 19497 (+)
Type: TC
Location: 18070 - 19497 (+)
Gene ID: MGYG000003358_28_20
Type: TC
Location: 19576 - 20820 (+)
Type: TC
Location: 19576 - 20820 (+)
Gene ID: MGYG000003358_28_21
Type: TF
Location: 20821 - 21720 (-)
Type: TF
Location: 20821 - 21720 (-)
Gene ID: MGYG000003358_28_22
Type: peptidase
Location: 21854 - 22660 (+)
Type: peptidase
Location: 21854 - 22660 (+)
Gene ID: MGYG000003358_28_23
Type: TC
Location: 22657 - 23553 (+)
Type: TC
Location: 22657 - 23553 (+)
Gene ID: MGYG000003358_28_24
Type: TF
Location: 23652 - 24632 (-)
Type: TF
Location: 23652 - 24632 (-)
Gene ID: MGYG000003358_28_25
Type: CAZyme
Location: 24708 - 25859 (-)
Type: CAZyme
Location: 24708 - 25859 (-)
Gene ID: MGYG000003358_28_26
Type: pfam
Location: 25856 - 26884 (-)
Type: pfam
Location: 25856 - 26884 (-)
Gene ID: MGYG000003358_28_27
Type: TC
Location: 26905 - 28146 (-)
Type: TC
Location: 26905 - 28146 (-)
Gene ID: MGYG000003358_28_28
Type: pfam
Location: 28277 - 29221 (+)
Type: pfam
Location: 28277 - 29221 (+)
Gene ID: MGYG000003358_28_29
Type: TC
Location: 29298 - 30689 (-)
Type: TC
Location: 29298 - 30689 (-)
Gene ID: MGYG000003358_28_30
Type: TC
Location: 30834 - 33026 (-)
Type: TC
Location: 30834 - 33026 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Kluyvera
Species
Kluyvera ascorbata
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.