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Cluster: MGYG000003339_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000003339_17 MGYG000003339_17_7 6320 6763 + 4.A.6.1.16
pfam MGYG000003339_17 MGYG000003339_17_8 6763 7044 + YajC
TC MGYG000003339_17 MGYG000003339_17_9 7081 7563 + 4.A.6.1.4
TC MGYG000003339_17 MGYG000003339_17_10 7654 8454 + 4.A.6.1.4
TC MGYG000003339_17 MGYG000003339_17_11 8444 9526 + 4.A.6.1.4
TF MGYG000003339_17 MGYG000003339_17_12 9712 10443 + GntR
STP MGYG000003339_17 MGYG000003339_17_13 10558 11724 + SIS | SIS
CAZyme MGYG000003339_17 MGYG000003339_17_14 11843 13012 + CE9
Gene ID: MGYG000003339_17_7
Type: TC
Location: 6320 - 6763 (+)
Gene ID: MGYG000003339_17_8
Type: pfam
Location: 6763 - 7044 (+)
Gene ID: MGYG000003339_17_9
Type: TC
Location: 7081 - 7563 (+)
Gene ID: MGYG000003339_17_10
Type: TC
Location: 7654 - 8454 (+)
Gene ID: MGYG000003339_17_11
Type: TC
Location: 8444 - 9526 (+)
Gene ID: MGYG000003339_17_12
Type: TF
Location: 9712 - 10443 (+)
Gene ID: MGYG000003339_17_13
Type: STP
Location: 10558 - 11724 (+)
Gene ID: MGYG000003339_17_14
Type: CAZyme
Location: 11843 - 13012 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000003339_17_8 vegan > omnivore 1.09505 0.00566

🧭 Explore Read Mapping of CGC

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