Cluster: MGYG000003339_CGC17
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 4
- Substrate:
- Genome ID: MGYG000003339
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003339_109 | MGYG000003339_109_17 | 16914 | 17915 | - | GT2 |
| NULL(UNKNOWN) | MGYG000003339_109 | MGYG000003339_109_18 | 17918 | 18628 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | MGYG000003339_109 | MGYG000003339_109_19 | 19068 | 19763 | - | Hexapep | Hexapep_2 |
| CAZyme | MGYG000003339_109 | MGYG000003339_109_20 | 19779 | 20816 | - | GT2 |
| NULL(UNKNOWN) | MGYG000003339_109 | MGYG000003339_109_21 | 20844 | 21386 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | MGYG000003339_109 | MGYG000003339_109_22 | 21370 | 22245 | - | LicD |
| CAZyme | MGYG000003339_109 | MGYG000003339_109_23 | 22247 | 23356 | - | GT4 |
| pfam | MGYG000003339_109 | MGYG000003339_109_24 | 23353 | 24462 | - | Epimerase_2 |
| CAZyme | MGYG000003339_109 | MGYG000003339_109_25 | 24455 | 25261 | - | GT26 |
| TC | MGYG000003339_109 | MGYG000003339_109_26 | 25248 | 26063 | - | 9.B.18.1.2 |
Gene ID: MGYG000003339_109_17
Type: CAZyme
Location: 16914 - 17915 (-)
Type: CAZyme
Location: 16914 - 17915 (-)
Gene ID: MGYG000003339_109_18
Type:
Location: 17918 - 18628 (-)
Type:
Location: 17918 - 18628 (-)
Gene ID: MGYG000003339_109_19
Type: pfam
Location: 19068 - 19763 (-)
Type: pfam
Location: 19068 - 19763 (-)
Gene ID: MGYG000003339_109_20
Type: CAZyme
Location: 19779 - 20816 (-)
Type: CAZyme
Location: 19779 - 20816 (-)
Gene ID: MGYG000003339_109_21
Type:
Location: 20844 - 21386 (-)
Type:
Location: 20844 - 21386 (-)
Gene ID: MGYG000003339_109_22
Type: pfam
Location: 21370 - 22245 (-)
Type: pfam
Location: 21370 - 22245 (-)
Gene ID: MGYG000003339_109_23
Type: CAZyme
Location: 22247 - 23356 (-)
Type: CAZyme
Location: 22247 - 23356 (-)
Gene ID: MGYG000003339_109_24
Type: pfam
Location: 23353 - 24462 (-)
Type: pfam
Location: 23353 - 24462 (-)
Gene ID: MGYG000003339_109_25
Type: CAZyme
Location: 24455 - 25261 (-)
Type: CAZyme
Location: 24455 - 25261 (-)
Gene ID: MGYG000003339_109_26
Type: TC
Location: 25248 - 26063 (-)
Type: TC
Location: 25248 - 26063 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp900765115
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.