Cluster: MGYG000003334_CGC6
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000003334
- CGC Family ID: CGCFAM_06612
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003334_6 | MGYG000003334_6_22 | 16010 | 17437 | - | GH1 |
| TF | MGYG000003334_6 | MGYG000003334_6_23 | 17565 | 18296 | - | HTH_6 |
| TC | MGYG000003334_6 | MGYG000003334_6_24 | 18498 | 19835 | + | 4.A.3.2.8 |
| TC | MGYG000003334_6 | MGYG000003334_6_25 | 19901 | 20653 | - | 1.A.8.2.7 |
| TC | MGYG000003334_6 | MGYG000003334_6_26 | 21028 | 21408 | + | 9.B.20.1.4 |
| sulfatase | MGYG000003334_6 | MGYG000003334_6_27 | 21606 | 22661 | + | S1_6 |
| TC | MGYG000003334_6 | MGYG000003334_6_28 | 22929 | 24527 | + | 1.B.76.1.8 |
| pfam | MGYG000003334_6 | MGYG000003334_6_29 | 24605 | 25462 | - | PseudoU_synth_2 |
| CAZyme | MGYG000003334_6 | MGYG000003334_6_30 | 25551 | 27608 | + | GT51 |
Gene ID: MGYG000003334_6_22
Type: CAZyme
Location: 16010 - 17437 (-)
Type: CAZyme
Location: 16010 - 17437 (-)
Gene ID: MGYG000003334_6_23
Type: TF
Location: 17565 - 18296 (-)
Type: TF
Location: 17565 - 18296 (-)
Gene ID: MGYG000003334_6_24
Type: TC
Location: 18498 - 19835 (+)
Type: TC
Location: 18498 - 19835 (+)
Gene ID: MGYG000003334_6_25
Type: TC
Location: 19901 - 20653 (-)
Type: TC
Location: 19901 - 20653 (-)
Gene ID: MGYG000003334_6_26
Type: TC
Location: 21028 - 21408 (+)
Type: TC
Location: 21028 - 21408 (+)
Gene ID: MGYG000003334_6_27
Type: sulfatase
Location: 21606 - 22661 (+)
Type: sulfatase
Location: 21606 - 22661 (+)
Gene ID: MGYG000003334_6_28
Type: TC
Location: 22929 - 24527 (+)
Type: TC
Location: 22929 - 24527 (+)
Gene ID: MGYG000003334_6_29
Type: pfam
Location: 24605 - 25462 (-)
Type: pfam
Location: 24605 - 25462 (-)
Gene ID: MGYG000003334_6_30
Type: CAZyme
Location: 25551 - 27608 (+)
Type: CAZyme
Location: 25551 - 27608 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Lactobacillus
Species
Lactobacillus gallinarum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.