Cluster: MGYG000003334_CGC4
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000003334
- CGC Family ID: CGCFAM_00097
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003334_2 | MGYG000003334_2_35 | 37731 | 39173 | - | GH13_18 |
| TC | MGYG000003334_2 | MGYG000003334_2_36 | 39293 | 40399 | - | 3.A.1.1.20 |
| CAZyme | MGYG000003334_2 | MGYG000003334_2_37 | 40414 | 41706 | - | GH32 |
| TC | MGYG000003334_2 | MGYG000003334_2_38 | 41706 | 42563 | - | 3.A.1.1.20 |
| TC | MGYG000003334_2 | MGYG000003334_2_39 | 42556 | 43440 | - | 3.A.1.1.20 |
| TC | MGYG000003334_2 | MGYG000003334_2_40 | 43461 | 43805 | - | 3.A.1.1.20 |
| TC | MGYG000003334_2 | MGYG000003334_2_41 | 43843 | 44757 | - | 3.A.1.1.20 |
Gene ID: MGYG000003334_2_35
Type: CAZyme
Location: 37731 - 39173 (-)
Type: CAZyme
Location: 37731 - 39173 (-)
Gene ID: MGYG000003334_2_36
Type: TC
Location: 39293 - 40399 (-)
Type: TC
Location: 39293 - 40399 (-)
Gene ID: MGYG000003334_2_37
Type: CAZyme
Location: 40414 - 41706 (-)
Type: CAZyme
Location: 40414 - 41706 (-)
Gene ID: MGYG000003334_2_38
Type: TC
Location: 41706 - 42563 (-)
Type: TC
Location: 41706 - 42563 (-)
Gene ID: MGYG000003334_2_39
Type: TC
Location: 42556 - 43440 (-)
Type: TC
Location: 42556 - 43440 (-)
Gene ID: MGYG000003334_2_40
Type: TC
Location: 43461 - 43805 (-)
Type: TC
Location: 43461 - 43805 (-)
Gene ID: MGYG000003334_2_41
Type: TC
Location: 43843 - 44757 (-)
Type: TC
Location: 43843 - 44757 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Lactobacillus
Species
Lactobacillus gallinarum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.