Cluster: MGYG000003334_CGC11
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003334
- CGC Family ID: CGCFAM_02173
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003334_17 | MGYG000003334_17_25 | 25924 | 26979 | - | GH170 |
| pfam | MGYG000003334_17 | MGYG000003334_17_26 | 27412 | 28425 | + | tRNA-synt_2 | AsnA |
| TC | MGYG000003334_17 | MGYG000003334_17_27 | 28489 | 29883 | - | 2.A.3.8.9 |
| peptidase | MGYG000003334_17 | MGYG000003334_17_28 | 29896 | 30624 | - | C26.UPW |
| STP | MGYG000003334_17 | MGYG000003334_17_29 | 30715 | 31824 | - | ATPase_2 |
| TC | MGYG000003334_17 | MGYG000003334_17_30 | 31978 | 33351 | - | 2.A.3.1.15 |
| TC | MGYG000003334_17 | MGYG000003334_17_31 | 33401 | 34798 | - | 2.A.3.1.16 |
| NULL(UNKNOWN) | MGYG000003334_17 | MGYG000003334_17_32 | 34850 | 35602 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| peptidase | MGYG000003334_17 | MGYG000003334_17_33 | 35697 | 36338 | - | S26.UPA |
| TC | MGYG000003334_17 | MGYG000003334_17_34 | 36445 | 38568 | - | 3.A.9.1.2 |
| pfam | MGYG000003334_17 | MGYG000003334_17_35 | 38852 | 39781 | - | DUF915 |
| STP | MGYG000003334_17 | MGYG000003334_17_36 | 39750 | 40991 | - | PTS_EIIC |
| TC | MGYG000003334_17 | MGYG000003334_17_37 | 41164 | 41865 | + | 3.A.1.122.7 |
Gene ID: MGYG000003334_17_25
Type: CAZyme
Location: 25924 - 26979 (-)
Type: CAZyme
Location: 25924 - 26979 (-)
Gene ID: MGYG000003334_17_26
Type: pfam
Location: 27412 - 28425 (+)
Type: pfam
Location: 27412 - 28425 (+)
Gene ID: MGYG000003334_17_27
Type: TC
Location: 28489 - 29883 (-)
Type: TC
Location: 28489 - 29883 (-)
Gene ID: MGYG000003334_17_28
Type: peptidase
Location: 29896 - 30624 (-)
Type: peptidase
Location: 29896 - 30624 (-)
Gene ID: MGYG000003334_17_29
Type: STP
Location: 30715 - 31824 (-)
Type: STP
Location: 30715 - 31824 (-)
Gene ID: MGYG000003334_17_30
Type: TC
Location: 31978 - 33351 (-)
Type: TC
Location: 31978 - 33351 (-)
Gene ID: MGYG000003334_17_31
Type: TC
Location: 33401 - 34798 (-)
Type: TC
Location: 33401 - 34798 (-)
Gene ID: MGYG000003334_17_32
Type:
Location: 34850 - 35602 (-)
Type:
Location: 34850 - 35602 (-)
Gene ID: MGYG000003334_17_33
Type: peptidase
Location: 35697 - 36338 (-)
Type: peptidase
Location: 35697 - 36338 (-)
Gene ID: MGYG000003334_17_34
Type: TC
Location: 36445 - 38568 (-)
Type: TC
Location: 36445 - 38568 (-)
Gene ID: MGYG000003334_17_35
Type: pfam
Location: 38852 - 39781 (-)
Type: pfam
Location: 38852 - 39781 (-)
Gene ID: MGYG000003334_17_36
Type: STP
Location: 39750 - 40991 (-)
Type: STP
Location: 39750 - 40991 (-)
Gene ID: MGYG000003334_17_37
Type: TC
Location: 41164 - 41865 (+)
Type: TC
Location: 41164 - 41865 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Lactobacillus
Species
Lactobacillus gallinarum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.