Cluster: MGYG000003334_CGC1
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003334
- CGC Family ID: CGCFAM_01385
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003334_1 | MGYG000003334_1_17 | 15975 | 17855 | + | 4.A.1.1.8 |
| TF | MGYG000003334_1 | MGYG000003334_1_18 | 17917 | 18726 | + | HTH_6 |
| NULL(UNKNOWN) | MGYG000003334_1 | MGYG000003334_1_19 | 18713 | 19210 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000003334_1 | MGYG000003334_1_20 | 19230 | 19712 | + | 4.A.1.1.12 |
| NULL(UNKNOWN) | MGYG000003334_1 | MGYG000003334_1_21 | 19839 | 20105 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| STP | MGYG000003334_1 | MGYG000003334_1_22 | 20179 | 20835 | + | Nitroreductase |
| TC | MGYG000003334_1 | MGYG000003334_1_23 | 20927 | 22288 | + | 9.A.40.2.1 |
| STP | MGYG000003334_1 | MGYG000003334_1_24 | 22396 | 22965 | + | Pribosyltran |
| TC | MGYG000003334_1 | MGYG000003334_1_25 | 22983 | 24293 | - | 2.A.3.8.12 |
| CAZyme | MGYG000003334_1 | MGYG000003334_1_26 | 24403 | 25107 | + | GH25 |
| TC | MGYG000003334_1 | MGYG000003334_1_27 | 25107 | 26342 | + | 3.A.18.1.1 |
| TC | MGYG000003334_1 | MGYG000003334_1_28 | 26339 | 27667 | + | 4.A.3.2.4 |
Gene ID: MGYG000003334_1_17
Type: TC
Location: 15975 - 17855 (+)
Type: TC
Location: 15975 - 17855 (+)
Gene ID: MGYG000003334_1_18
Type: TF
Location: 17917 - 18726 (+)
Type: TF
Location: 17917 - 18726 (+)
Gene ID: MGYG000003334_1_19
Type:
Location: 18713 - 19210 (+)
Type:
Location: 18713 - 19210 (+)
Gene ID: MGYG000003334_1_20
Type: TC
Location: 19230 - 19712 (+)
Type: TC
Location: 19230 - 19712 (+)
Gene ID: MGYG000003334_1_21
Type:
Location: 19839 - 20105 (+)
Type:
Location: 19839 - 20105 (+)
Gene ID: MGYG000003334_1_22
Type: STP
Location: 20179 - 20835 (+)
Type: STP
Location: 20179 - 20835 (+)
Gene ID: MGYG000003334_1_23
Type: TC
Location: 20927 - 22288 (+)
Type: TC
Location: 20927 - 22288 (+)
Gene ID: MGYG000003334_1_24
Type: STP
Location: 22396 - 22965 (+)
Type: STP
Location: 22396 - 22965 (+)
Gene ID: MGYG000003334_1_25
Type: TC
Location: 22983 - 24293 (-)
Type: TC
Location: 22983 - 24293 (-)
Gene ID: MGYG000003334_1_26
Type: CAZyme
Location: 24403 - 25107 (+)
Type: CAZyme
Location: 24403 - 25107 (+)
Gene ID: MGYG000003334_1_27
Type: TC
Location: 25107 - 26342 (+)
Type: TC
Location: 25107 - 26342 (+)
Gene ID: MGYG000003334_1_28
Type: TC
Location: 26339 - 27667 (+)
Type: TC
Location: 26339 - 27667 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Lactobacillus
Species
Lactobacillus gallinarum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.