Cluster: MGYG000003330_CGC7
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 8
- Substrate:
- Genome ID: MGYG000003330
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003330_13 | MGYG000003330_13_29 | 30532 | 32658 | + | GT66 |
| NULL(UNKNOWN) | MGYG000003330_13 | MGYG000003330_13_30 | 32658 | 34175 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000003330_13 | MGYG000003330_13_31 | 34176 | 34937 | + | GT25 |
| CAZyme | MGYG000003330_13 | MGYG000003330_13_32 | 34938 | 35870 | + | GT2 |
| CAZyme | MGYG000003330_13 | MGYG000003330_13_33 | 35867 | 36925 | + | GT4 |
| CAZyme | MGYG000003330_13 | MGYG000003330_13_34 | 36922 | 37965 | + | GT4 |
| CAZyme | MGYG000003330_13 | MGYG000003330_13_35 | 37962 | 39086 | + | GT4 |
| CAZyme | MGYG000003330_13 | MGYG000003330_13_36 | 39079 | 41178 | + | GT66 |
| CAZyme | MGYG000003330_13 | MGYG000003330_13_37 | 41181 | 42296 | + | GT4 |
| TC | MGYG000003330_13 | MGYG000003330_13_38 | 42289 | 42894 | + | 9.B.18.1.2 |
| pfam | MGYG000003330_13 | MGYG000003330_13_39 | 42881 | 43471 | + | Hexapep | Hexapep | PglD_N |
| pfam | MGYG000003330_13 | MGYG000003330_13_40 | 43520 | 44611 | + | Aminotran_5 | DegT_DnrJ_EryC1 | Beta_elim_lyase |
| TC | MGYG000003330_13 | MGYG000003330_13_41 | 44612 | 46393 | + | 9.B.18.2.1 |
Gene ID: MGYG000003330_13_29
Type: CAZyme
Location: 30532 - 32658 (+)
Type: CAZyme
Location: 30532 - 32658 (+)
Gene ID: MGYG000003330_13_30
Type:
Location: 32658 - 34175 (+)
Type:
Location: 32658 - 34175 (+)
Gene ID: MGYG000003330_13_31
Type: CAZyme
Location: 34176 - 34937 (+)
Type: CAZyme
Location: 34176 - 34937 (+)
Gene ID: MGYG000003330_13_32
Type: CAZyme
Location: 34938 - 35870 (+)
Type: CAZyme
Location: 34938 - 35870 (+)
Gene ID: MGYG000003330_13_33
Type: CAZyme
Location: 35867 - 36925 (+)
Type: CAZyme
Location: 35867 - 36925 (+)
Gene ID: MGYG000003330_13_34
Type: CAZyme
Location: 36922 - 37965 (+)
Type: CAZyme
Location: 36922 - 37965 (+)
Gene ID: MGYG000003330_13_35
Type: CAZyme
Location: 37962 - 39086 (+)
Type: CAZyme
Location: 37962 - 39086 (+)
Gene ID: MGYG000003330_13_36
Type: CAZyme
Location: 39079 - 41178 (+)
Type: CAZyme
Location: 39079 - 41178 (+)
Gene ID: MGYG000003330_13_37
Type: CAZyme
Location: 41181 - 42296 (+)
Type: CAZyme
Location: 41181 - 42296 (+)
Gene ID: MGYG000003330_13_38
Type: TC
Location: 42289 - 42894 (+)
Type: TC
Location: 42289 - 42894 (+)
Gene ID: MGYG000003330_13_39
Type: pfam
Location: 42881 - 43471 (+)
Type: pfam
Location: 42881 - 43471 (+)
Gene ID: MGYG000003330_13_40
Type: pfam
Location: 43520 - 44611 (+)
Type: pfam
Location: 43520 - 44611 (+)
Gene ID: MGYG000003330_13_41
Type: TC
Location: 44612 - 46393 (+)
Type: TC
Location: 44612 - 46393 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Campylobacterota
Class
Campylobacteria
Order
Campylobacterales
Family
Campylobacteraceae
Genus
Campylobacter_A
Species
Campylobacter_A concisus_Q
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.