Cluster: MGYG000003330_CGC6
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003330
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003330_12 | MGYG000003330_12_83 | 65930 | 66922 | + | 2.A.56.1.1 |
| pfam | MGYG000003330_12 | MGYG000003330_12_84 | 66922 | 67464 | + | DctQ |
| TC | MGYG000003330_12 | MGYG000003330_12_85 | 67476 | 68759 | + | 2.A.56.1.1 |
| TC | MGYG000003330_12 | MGYG000003330_12_86 | 68785 | 69837 | - | 9.B.34.1.3 |
| TC | MGYG000003330_12 | MGYG000003330_12_87 | 69830 | 70909 | - | 9.B.34.1.3 |
| NULL(UNKNOWN) | MGYG000003330_12 | MGYG000003330_12_88 | 70956 | 71114 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000003330_12 | MGYG000003330_12_89 | 71125 | 72969 | - | 1.A.23.4.10 |
| TC | MGYG000003330_12 | MGYG000003330_12_90 | 72962 | 73606 | - | 2.A.53.3.12 |
| TC | MGYG000003330_12 | MGYG000003330_12_91 | 73777 | 74475 | + | 1.A.14.3.3 |
| pfam | MGYG000003330_12 | MGYG000003330_12_92 | 74468 | 74851 | + | ThiD2 |
| pfam | MGYG000003330_12 | MGYG000003330_12_93 | 74918 | 75247 | + | SecG |
| CAZyme | MGYG000003330_12 | MGYG000003330_12_94 | 75250 | 76209 | + | CE4 |
Gene ID: MGYG000003330_12_83
Type: TC
Location: 65930 - 66922 (+)
Type: TC
Location: 65930 - 66922 (+)
Gene ID: MGYG000003330_12_84
Type: pfam
Location: 66922 - 67464 (+)
Type: pfam
Location: 66922 - 67464 (+)
Gene ID: MGYG000003330_12_85
Type: TC
Location: 67476 - 68759 (+)
Type: TC
Location: 67476 - 68759 (+)
Gene ID: MGYG000003330_12_86
Type: TC
Location: 68785 - 69837 (-)
Type: TC
Location: 68785 - 69837 (-)
Gene ID: MGYG000003330_12_87
Type: TC
Location: 69830 - 70909 (-)
Type: TC
Location: 69830 - 70909 (-)
Gene ID: MGYG000003330_12_88
Type:
Location: 70956 - 71114 (-)
Type:
Location: 70956 - 71114 (-)
Gene ID: MGYG000003330_12_89
Type: TC
Location: 71125 - 72969 (-)
Type: TC
Location: 71125 - 72969 (-)
Gene ID: MGYG000003330_12_90
Type: TC
Location: 72962 - 73606 (-)
Type: TC
Location: 72962 - 73606 (-)
Gene ID: MGYG000003330_12_91
Type: TC
Location: 73777 - 74475 (+)
Type: TC
Location: 73777 - 74475 (+)
Gene ID: MGYG000003330_12_92
Type: pfam
Location: 74468 - 74851 (+)
Type: pfam
Location: 74468 - 74851 (+)
Gene ID: MGYG000003330_12_93
Type: pfam
Location: 74918 - 75247 (+)
Type: pfam
Location: 74918 - 75247 (+)
Gene ID: MGYG000003330_12_94
Type: CAZyme
Location: 75250 - 76209 (+)
Type: CAZyme
Location: 75250 - 76209 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Campylobacterota
Class
Campylobacteria
Order
Campylobacterales
Family
Campylobacteraceae
Genus
Campylobacter_A
Species
Campylobacter_A concisus_Q
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.