Cluster: MGYG000003330_CGC5
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000003330
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003330_11 | MGYG000003330_11_22 | 15891 | 16964 | + | 3.A.6.2.1 |
| TC | MGYG000003330_11 | MGYG000003330_11_23 | 17016 | 18683 | - | 2.A.13.1.2 |
| pfam | MGYG000003330_11 | MGYG000003330_11_24 | 19268 | 20068 | - | TonB_C | TonB_2 |
| pfam | MGYG000003330_11 | MGYG000003330_11_25 | 20043 | 20426 | - | ExbD |
| TC | MGYG000003330_11 | MGYG000003330_11_26 | 20413 | 20841 | - | 1.A.30.2.6 |
| CAZyme | MGYG000003330_11 | MGYG000003330_11_27 | 20977 | 21921 | - | GT9 |
| CAZyme | MGYG000003330_11 | MGYG000003330_11_28 | 21918 | 22961 | - | GT4 |
Gene ID: MGYG000003330_11_22
Type: TC
Location: 15891 - 16964 (+)
Type: TC
Location: 15891 - 16964 (+)
Gene ID: MGYG000003330_11_23
Type: TC
Location: 17016 - 18683 (-)
Type: TC
Location: 17016 - 18683 (-)
Gene ID: MGYG000003330_11_24
Type: pfam
Location: 19268 - 20068 (-)
Type: pfam
Location: 19268 - 20068 (-)
Gene ID: MGYG000003330_11_25
Type: pfam
Location: 20043 - 20426 (-)
Type: pfam
Location: 20043 - 20426 (-)
Gene ID: MGYG000003330_11_26
Type: TC
Location: 20413 - 20841 (-)
Type: TC
Location: 20413 - 20841 (-)
Gene ID: MGYG000003330_11_27
Type: CAZyme
Location: 20977 - 21921 (-)
Type: CAZyme
Location: 20977 - 21921 (-)
Gene ID: MGYG000003330_11_28
Type: CAZyme
Location: 21918 - 22961 (-)
Type: CAZyme
Location: 21918 - 22961 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Campylobacterota
Class
Campylobacteria
Order
Campylobacterales
Family
Campylobacteraceae
Genus
Campylobacter_A
Species
Campylobacter_A concisus_Q
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.