Cluster: MGYG000003330_CGC3
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003330
- CGC Family ID: CGCFAM_08917
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003330_5 | MGYG000003330_5_356 | 364200 | 365255 | - | GH3 |
| pfam | MGYG000003330_5 | MGYG000003330_5_357 | 365252 | 366142 | - | NAD_Gly3P_dh_N | NAD_Gly3P_dh_C | GPD_NAD_C_bact |
| pfam | MGYG000003330_5 | MGYG000003330_5_358 | 366155 | 367576 | - | GatB_Yqey | GatB_N |
| TC | MGYG000003330_5 | MGYG000003330_5_359 | 367741 | 368424 | - | 3.A.2.1.6 |
| TC | MGYG000003330_5 | MGYG000003330_5_360 | 368490 | 369251 | - | 2.A.102.3.1 |
Gene ID: MGYG000003330_5_356
Type: CAZyme
Location: 364200 - 365255 (-)
Type: CAZyme
Location: 364200 - 365255 (-)
Gene ID: MGYG000003330_5_357
Type: pfam
Location: 365252 - 366142 (-)
Type: pfam
Location: 365252 - 366142 (-)
Gene ID: MGYG000003330_5_358
Type: pfam
Location: 366155 - 367576 (-)
Type: pfam
Location: 366155 - 367576 (-)
Gene ID: MGYG000003330_5_359
Type: TC
Location: 367741 - 368424 (-)
Type: TC
Location: 367741 - 368424 (-)
Gene ID: MGYG000003330_5_360
Type: TC
Location: 368490 - 369251 (-)
Type: TC
Location: 368490 - 369251 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Campylobacterota
Class
Campylobacteria
Order
Campylobacterales
Family
Campylobacteraceae
Genus
Campylobacter_A
Species
Campylobacter_A concisus_Q
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.