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Cluster: MGYG000003330_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000003330_5 MGYG000003330_5_278 270909 271931 - GT28
TC MGYG000003330_5 MGYG000003330_5_279 271928 273088 - 2.A.103.1.1
pfam MGYG000003330_5 MGYG000003330_5_280 273181 273969 + Asp_Glu_race
pfam MGYG000003330_5 MGYG000003330_5_281 274042 274632 - VTT_dom
TC MGYG000003330_5 MGYG000003330_5_282 274771 275550 - 3.A.1.24.5
TC MGYG000003330_5 MGYG000003330_5_283 275627 276409 - 3.A.1.24.5
TC MGYG000003330_5 MGYG000003330_5_284 276668 277342 - 3.A.1.24.5
TC MGYG000003330_5 MGYG000003330_5_285 277342 278298 - 3.A.1.24.2
pfam MGYG000003330_5 MGYG000003330_5_286 278298 280922 - tRNA-synt_1 | Anticodon_1 | tRNA-synt_1g | tRNA-synt_1g | Val_tRNA-synt_C | tRNA-synt_1_2
peptidase MGYG000003330_5 MGYG000003330_5_287 281045 286165 - I39.UPW
CAZyme MGYG000003330_5 MGYG000003330_5_288 286167 288335 - GT51
pfam MGYG000003330_5 MGYG000003330_5_289 288401 290434 + UvrD-helicase | AAA_19 | UvrD_C | UvrD_C_2
TC MGYG000003330_5 MGYG000003330_5_290 290489 291682 + 3.A.1.122.1
TC MGYG000003330_5 MGYG000003330_5_291 291683 293611 + 3.A.1.122.12
TC MGYG000003330_5 MGYG000003330_5_292 293613 294959 + 1.B.17.3.7
pfam MGYG000003330_5 MGYG000003330_5_293 295513 295944 - YqeY
pfam MGYG000003330_5 MGYG000003330_5_294 295975 296877 - Ppx-GppA
TC MGYG000003330_5 MGYG000003330_5_295 297008 298546 + 2.A.20.2.4
TC MGYG000003330_5 MGYG000003330_5_296 298651 301224 - 3.A.9.1.2
TC MGYG000003330_5 MGYG000003330_5_297 301446 302750 + 9.B.174.1.1
Gene ID: MGYG000003330_5_278
Type: CAZyme
Location: 270909 - 271931 (-)
Gene ID: MGYG000003330_5_279
Type: TC
Location: 271928 - 273088 (-)
Gene ID: MGYG000003330_5_280
Type: pfam
Location: 273181 - 273969 (+)
Gene ID: MGYG000003330_5_281
Type: pfam
Location: 274042 - 274632 (-)
Gene ID: MGYG000003330_5_282
Type: TC
Location: 274771 - 275550 (-)
Gene ID: MGYG000003330_5_283
Type: TC
Location: 275627 - 276409 (-)
Gene ID: MGYG000003330_5_284
Type: TC
Location: 276668 - 277342 (-)
Gene ID: MGYG000003330_5_285
Type: TC
Location: 277342 - 278298 (-)
Gene ID: MGYG000003330_5_286
Type: pfam
Location: 278298 - 280922 (-)
Gene ID: MGYG000003330_5_287
Type: peptidase
Location: 281045 - 286165 (-)
Gene ID: MGYG000003330_5_288
Type: CAZyme
Location: 286167 - 288335 (-)
Gene ID: MGYG000003330_5_289
Type: pfam
Location: 288401 - 290434 (+)
Gene ID: MGYG000003330_5_290
Type: TC
Location: 290489 - 291682 (+)
Gene ID: MGYG000003330_5_291
Type: TC
Location: 291683 - 293611 (+)
Gene ID: MGYG000003330_5_292
Type: TC
Location: 293613 - 294959 (+)
Gene ID: MGYG000003330_5_293
Type: pfam
Location: 295513 - 295944 (-)
Gene ID: MGYG000003330_5_294
Type: pfam
Location: 295975 - 296877 (-)
Gene ID: MGYG000003330_5_295
Type: TC
Location: 297008 - 298546 (+)
Gene ID: MGYG000003330_5_296
Type: TC
Location: 298651 - 301224 (-)
Gene ID: MGYG000003330_5_297
Type: TC
Location: 301446 - 302750 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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