Cluster: MGYG000003314_CGC9
🧬 Cluster Details
- Gene Count: 16
- CAZyme Count: 8
- Substrate:
- Genome ID: MGYG000003314
- CGC Family ID: CGCFAM_07839
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003314_11 | MGYG000003314_11_188 | 218670 | 221177 | - | GT4 |
| CAZyme | MGYG000003314_11 | MGYG000003314_11_189 | 221652 | 223022 | - | GT4 |
| TC | MGYG000003314_11 | MGYG000003314_11_190 | 223024 | 224316 | - | 3.A.1.103.4 |
| TC | MGYG000003314_11 | MGYG000003314_11_191 | 224316 | 225143 | - | 3.A.1.103.6 |
| NULL(UNKNOWN) | MGYG000003314_11 | MGYG000003314_11_192 | 225250 | 226638 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | MGYG000003314_11 | MGYG000003314_11_193 | 226778 | 227395 | + | dTDP_sugar_isom |
| CAZyme | MGYG000003314_11 | MGYG000003314_11_194 | 227388 | 228374 | + | GT2 |
| pfam | MGYG000003314_11 | MGYG000003314_11_195 | 228376 | 229251 | - | Epimerase | RmlD_sub_bind | GDP_Man_Dehyd |
| CAZyme | MGYG000003314_11 | MGYG000003314_11_196 | 229295 | 230461 | - | GT4 |
| CAZyme | MGYG000003314_11 | MGYG000003314_11_197 | 230585 | 231607 | - | GT2 |
| NULL(UNKNOWN) | MGYG000003314_11 | MGYG000003314_11_198 | 231608 | 234505 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | MGYG000003314_11 | MGYG000003314_11_199 | 234689 | 236407 | - | DUF2142 |
| CAZyme | MGYG000003314_11 | MGYG000003314_11_200 | 236484 | 237242 | + | GT2 |
| pfam | MGYG000003314_11 | MGYG000003314_11_201 | 237239 | 237667 | + | DUF2304 |
| CAZyme | MGYG000003314_11 | MGYG000003314_11_202 | 237699 | 238601 | - | GT2 |
| CAZyme | MGYG000003314_11 | MGYG000003314_11_203 | 238598 | 239341 | - | GT2 |
Gene ID: MGYG000003314_11_188
Type: CAZyme
Location: 218670 - 221177 (-)
Type: CAZyme
Location: 218670 - 221177 (-)
Gene ID: MGYG000003314_11_189
Type: CAZyme
Location: 221652 - 223022 (-)
Type: CAZyme
Location: 221652 - 223022 (-)
Gene ID: MGYG000003314_11_190
Type: TC
Location: 223024 - 224316 (-)
Type: TC
Location: 223024 - 224316 (-)
Gene ID: MGYG000003314_11_191
Type: TC
Location: 224316 - 225143 (-)
Type: TC
Location: 224316 - 225143 (-)
Gene ID: MGYG000003314_11_192
Type:
Location: 225250 - 226638 (-)
Type:
Location: 225250 - 226638 (-)
Gene ID: MGYG000003314_11_193
Type: pfam
Location: 226778 - 227395 (+)
Type: pfam
Location: 226778 - 227395 (+)
Gene ID: MGYG000003314_11_194
Type: CAZyme
Location: 227388 - 228374 (+)
Type: CAZyme
Location: 227388 - 228374 (+)
Gene ID: MGYG000003314_11_195
Type: pfam
Location: 228376 - 229251 (-)
Type: pfam
Location: 228376 - 229251 (-)
Gene ID: MGYG000003314_11_196
Type: CAZyme
Location: 229295 - 230461 (-)
Type: CAZyme
Location: 229295 - 230461 (-)
Gene ID: MGYG000003314_11_197
Type: CAZyme
Location: 230585 - 231607 (-)
Type: CAZyme
Location: 230585 - 231607 (-)
Gene ID: MGYG000003314_11_198
Type:
Location: 231608 - 234505 (-)
Type:
Location: 231608 - 234505 (-)
Gene ID: MGYG000003314_11_199
Type: pfam
Location: 234689 - 236407 (-)
Type: pfam
Location: 234689 - 236407 (-)
Gene ID: MGYG000003314_11_200
Type: CAZyme
Location: 236484 - 237242 (+)
Type: CAZyme
Location: 236484 - 237242 (+)
Gene ID: MGYG000003314_11_201
Type: pfam
Location: 237239 - 237667 (+)
Type: pfam
Location: 237239 - 237667 (+)
Gene ID: MGYG000003314_11_202
Type: CAZyme
Location: 237699 - 238601 (-)
Type: CAZyme
Location: 237699 - 238601 (-)
Gene ID: MGYG000003314_11_203
Type: CAZyme
Location: 238598 - 239341 (-)
Type: CAZyme
Location: 238598 - 239341 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Actinobaculum
Species
Actinobaculum massiliense
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.