Cluster: MGYG000003314_CGC3
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: MGYG000003314
- CGC Family ID: CGCFAM_00339
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003314_7 | MGYG000003314_7_159 | 192603 | 196070 | + | GH2 |
| TC | MGYG000003314_7 | MGYG000003314_7_160 | 196153 | 197556 | + | 3.A.1.1.40 |
| TC | MGYG000003314_7 | MGYG000003314_7_161 | 197657 | 198613 | + | 3.A.1.1.20 |
| TC | MGYG000003314_7 | MGYG000003314_7_162 | 198610 | 199560 | + | 3.A.1.1.36 |
| CAZyme | MGYG000003314_7 | MGYG000003314_7_163 | 199773 | 201143 | + | GH29 |
| TC | MGYG000003314_7 | MGYG000003314_7_164 | 201264 | 202016 | - | 2.A.102.4.3 |
| CAZyme | MGYG000003314_7 | MGYG000003314_7_165 | 202365 | 206180 | + | GH111 |
Gene ID: MGYG000003314_7_159
Type: CAZyme
Location: 192603 - 196070 (+)
Type: CAZyme
Location: 192603 - 196070 (+)
Gene ID: MGYG000003314_7_160
Type: TC
Location: 196153 - 197556 (+)
Type: TC
Location: 196153 - 197556 (+)
Gene ID: MGYG000003314_7_161
Type: TC
Location: 197657 - 198613 (+)
Type: TC
Location: 197657 - 198613 (+)
Gene ID: MGYG000003314_7_162
Type: TC
Location: 198610 - 199560 (+)
Type: TC
Location: 198610 - 199560 (+)
Gene ID: MGYG000003314_7_163
Type: CAZyme
Location: 199773 - 201143 (+)
Type: CAZyme
Location: 199773 - 201143 (+)
Gene ID: MGYG000003314_7_164
Type: TC
Location: 201264 - 202016 (-)
Type: TC
Location: 201264 - 202016 (-)
Gene ID: MGYG000003314_7_165
Type: CAZyme
Location: 202365 - 206180 (+)
Type: CAZyme
Location: 202365 - 206180 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Actinobaculum
Species
Actinobaculum massiliense
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.