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Cluster: MGYG000003292_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000003292_155 MGYG000003292_155_4 2746 3894 - 3.A.1.1.24
CAZyme MGYG000003292_155 MGYG000003292_155_5 3897 5396 - GH31_19
CAZyme MGYG000003292_155 MGYG000003292_155_6 5398 7368 - GH3
CAZyme MGYG000003292_155 MGYG000003292_155_7 7365 8561 - GH37
pfam MGYG000003292_155 MGYG000003292_155_8 8618 10231 - Big_2
pfam MGYG000003292_155 MGYG000003292_155_9 10259 11917 - Bmp
TC MGYG000003292_155 MGYG000003292_155_10 11922 12857 - 3.A.1.1.9
TC MGYG000003292_155 MGYG000003292_155_11 12867 13805 - 3.A.1.1.9
TC MGYG000003292_155 MGYG000003292_155_12 13807 15450 - 3.A.1.1.9
TF MGYG000003292_155 MGYG000003292_155_13 15558 16730 - HTH_AraC | HTH_AraC
TC MGYG000003292_155 MGYG000003292_155_14 16734 18434 - 8.A.59.2.1
Gene ID: MGYG000003292_155_4
Type: TC
Location: 2746 - 3894 (-)
Gene ID: MGYG000003292_155_5
Type: CAZyme
Location: 3897 - 5396 (-)
Gene ID: MGYG000003292_155_6
Type: CAZyme
Location: 5398 - 7368 (-)
Gene ID: MGYG000003292_155_7
Type: CAZyme
Location: 7365 - 8561 (-)
Gene ID: MGYG000003292_155_8
Type: pfam
Location: 8618 - 10231 (-)
Gene ID: MGYG000003292_155_9
Type: pfam
Location: 10259 - 11917 (-)
Gene ID: MGYG000003292_155_10
Type: TC
Location: 11922 - 12857 (-)
Gene ID: MGYG000003292_155_11
Type: TC
Location: 12867 - 13805 (-)
Gene ID: MGYG000003292_155_12
Type: TC
Location: 13807 - 15450 (-)
Gene ID: MGYG000003292_155_13
Type: TF
Location: 15558 - 16730 (-)
Gene ID: MGYG000003292_155_14
Type: TC
Location: 16734 - 18434 (-)

Taxonomic Lineage

Domain
Bacteria
Order
RFN20
Family
CAG-288

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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