Cluster: MGYG000003283_CGC13
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003283
- CGC Family ID: CGCFAM_10942
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003283_43 | MGYG000003283_43_1 | 359 | 1318 | - | GH24 |
| NULL(UNKNOWN) | MGYG000003283_43 | MGYG000003283_43_2 | 1469 | 2068 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | MGYG000003283_43 | MGYG000003283_43_3 | 2543 | 3055 | + | HTH_3 |
| TC | MGYG000003283_43 | MGYG000003283_43_4 | 3207 | 3950 | + | 1.A.30.2.2 |
| TC | MGYG000003283_43 | MGYG000003283_43_5 | 3950 | 4414 | + | 1.A.30.2.7 |
Gene ID: MGYG000003283_43_1
Type: CAZyme
Location: 359 - 1318 (-)
Type: CAZyme
Location: 359 - 1318 (-)
Gene ID: MGYG000003283_43_2
Type:
Location: 1469 - 2068 (-)
Type:
Location: 1469 - 2068 (-)
Gene ID: MGYG000003283_43_3
Type: TF
Location: 2543 - 3055 (+)
Type: TF
Location: 2543 - 3055 (+)
Gene ID: MGYG000003283_43_4
Type: TC
Location: 3207 - 3950 (+)
Type: TC
Location: 3207 - 3950 (+)
Gene ID: MGYG000003283_43_5
Type: TC
Location: 3950 - 4414 (+)
Type: TC
Location: 3950 - 4414 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-239
Genus
JAFUYI01
Species
JAFUYI01 sp900762565
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.