Cluster: MGYG000003283_CGC11
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000003283
- CGC Family ID: CGCFAM_05513
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003283_31 | MGYG000003283_31_23 | 23017 | 23991 | - | 3.A.14.1.1 |
| pfam | MGYG000003283_31 | MGYG000003283_31_24 | 24008 | 24508 | - | SH3_4 |
| peptidase | MGYG000003283_31 | MGYG000003283_31_25 | 24596 | 25696 | + | M20.UPW |
| CAZyme | MGYG000003283_31 | MGYG000003283_31_26 | 25700 | 26737 | - | GH24 |
| NULL(UNKNOWN) | MGYG000003283_31 | MGYG000003283_31_27 | 26890 | 27291 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000003283_31 | MGYG000003283_31_28 | 27512 | 28444 | - | GT2 |
Gene ID: MGYG000003283_31_23
Type: TC
Location: 23017 - 23991 (-)
Type: TC
Location: 23017 - 23991 (-)
Gene ID: MGYG000003283_31_24
Type: pfam
Location: 24008 - 24508 (-)
Type: pfam
Location: 24008 - 24508 (-)
Gene ID: MGYG000003283_31_25
Type: peptidase
Location: 24596 - 25696 (+)
Type: peptidase
Location: 24596 - 25696 (+)
Gene ID: MGYG000003283_31_26
Type: CAZyme
Location: 25700 - 26737 (-)
Type: CAZyme
Location: 25700 - 26737 (-)
Gene ID: MGYG000003283_31_27
Type:
Location: 26890 - 27291 (+)
Type:
Location: 26890 - 27291 (+)
Gene ID: MGYG000003283_31_28
Type: CAZyme
Location: 27512 - 28444 (-)
Type: CAZyme
Location: 27512 - 28444 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
RF32
Family
CAG-239
Genus
JAFUYI01
Species
JAFUYI01 sp900762565
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.