Cluster: MGYG000003276_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003276
- CGC Family ID: CGCFAM_00027
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003276_1 | MGYG000003276_1_55 | 68227 | 69612 | + | 3.A.1.17.10 |
| TF | MGYG000003276_1 | MGYG000003276_1_56 | 69752 | 70744 | - | HTH_AraC | HTH_AraC |
| CAZyme | MGYG000003276_1 | MGYG000003276_1_57 | 70907 | 72385 | + | GH1 |
| TC | MGYG000003276_1 | MGYG000003276_1_58 | 72398 | 73780 | + | 4.A.1.2.11 |
Gene ID: MGYG000003276_1_55
Type: TC
Location: 68227 - 69612 (+)
Type: TC
Location: 68227 - 69612 (+)
Gene ID: MGYG000003276_1_56
Type: TF
Location: 69752 - 70744 (-)
Type: TF
Location: 69752 - 70744 (-)
Gene ID: MGYG000003276_1_57
Type: CAZyme
Location: 70907 - 72385 (+)
Type: CAZyme
Location: 70907 - 72385 (+)
Gene ID: MGYG000003276_1_58
Type: TC
Location: 72398 - 73780 (+)
Type: TC
Location: 72398 - 73780 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp900762345
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.