Cluster: MGYG000003276_CGC11
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003276
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003276_12 | MGYG000003276_12_56 | 68058 | 68546 | + | 4.A.6.1.9 |
| TC | MGYG000003276_12 | MGYG000003276_12_57 | 68618 | 69475 | + | 4.A.6.1.1 |
| TC | MGYG000003276_12 | MGYG000003276_12_58 | 69475 | 70302 | + | 4.A.6.1.6 |
| NULL(UNKNOWN) | MGYG000003276_12 | MGYG000003276_12_59 | 70499 | 70825 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | MGYG000003276_12 | MGYG000003276_12_60 | 70930 | 71370 | + | MarR |
| CAZyme | MGYG000003276_12 | MGYG000003276_12_61 | 71881 | 78294 | + | GH31_18 |
Gene ID: MGYG000003276_12_56
Type: TC
Location: 68058 - 68546 (+)
Type: TC
Location: 68058 - 68546 (+)
Gene ID: MGYG000003276_12_57
Type: TC
Location: 68618 - 69475 (+)
Type: TC
Location: 68618 - 69475 (+)
Gene ID: MGYG000003276_12_58
Type: TC
Location: 69475 - 70302 (+)
Type: TC
Location: 69475 - 70302 (+)
Gene ID: MGYG000003276_12_59
Type:
Location: 70499 - 70825 (+)
Type:
Location: 70499 - 70825 (+)
Gene ID: MGYG000003276_12_60
Type: TF
Location: 70930 - 71370 (+)
Type: TF
Location: 70930 - 71370 (+)
Gene ID: MGYG000003276_12_61
Type: CAZyme
Location: 71881 - 78294 (+)
Type: CAZyme
Location: 71881 - 78294 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp900762345
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000003276_12_61 | vegetarian > vegan | 2.07869 | 0.01195 |