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Cluster: MGYG000003275_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000003275_24 MGYG000003275_24_16 17506 18675 - CE9
STP MGYG000003275_24 MGYG000003275_24_17 18793 19959 - SIS | SIS
TF MGYG000003275_24 MGYG000003275_24_18 20074 20805 - GntR
TC MGYG000003275_24 MGYG000003275_24_19 20991 22073 - 4.A.6.1.4
TC MGYG000003275_24 MGYG000003275_24_20 22063 22863 - 4.A.6.1.4
TC MGYG000003275_24 MGYG000003275_24_21 22954 23436 - 4.A.6.1.4
pfam MGYG000003275_24 MGYG000003275_24_22 23473 23754 - YajC
TC MGYG000003275_24 MGYG000003275_24_23 23754 24197 - 4.A.6.1.16
Gene ID: MGYG000003275_24_16
Type: CAZyme
Location: 17506 - 18675 (-)
Gene ID: MGYG000003275_24_17
Type: STP
Location: 18793 - 19959 (-)
Gene ID: MGYG000003275_24_18
Type: TF
Location: 20074 - 20805 (-)
Gene ID: MGYG000003275_24_19
Type: TC
Location: 20991 - 22073 (-)
Gene ID: MGYG000003275_24_20
Type: TC
Location: 22063 - 22863 (-)
Gene ID: MGYG000003275_24_21
Type: TC
Location: 22954 - 23436 (-)
Gene ID: MGYG000003275_24_22
Type: pfam
Location: 23473 - 23754 (-)
Gene ID: MGYG000003275_24_23
Type: TC
Location: 23754 - 24197 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000003275_24_22 vegan > omnivore 1.03540 0.00701

🧭 Explore Read Mapping of CGC

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