Cluster: MGYG000003275_CGC16
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003275
- Continent: South America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003275_52 | MGYG000003275_52_128 | 147853 | 148647 | - | 3.A.1.34.1 |
| TC | MGYG000003275_52 | MGYG000003275_52_129 | 148640 | 149563 | - | 3.A.1.34.1 |
| TC | MGYG000003275_52 | MGYG000003275_52_130 | 149768 | 150748 | - | 3.A.1.34.1 |
| NULL(UNKNOWN) | MGYG000003275_52 | MGYG000003275_52_131 | 150909 | 151694 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | MGYG000003275_52 | MGYG000003275_52_132 | 151953 | 153356 | - | tRNA-synt_2 | tRNA_anti-codon |
| TC | MGYG000003275_52 | MGYG000003275_52_133 | 153539 | 154102 | - | 4.A.1.2.6 |
| peptidase | MGYG000003275_52 | MGYG000003275_52_134 | 154346 | 155248 | + | S09.UPW |
| TC | MGYG000003275_52 | MGYG000003275_52_135 | 155593 | 157953 | + | 9.A.8.1.6 |
| TC | MGYG000003275_52 | MGYG000003275_52_136 | 158075 | 159271 | + | 2.A.1.2.18 |
| CAZyme | MGYG000003275_52 | MGYG000003275_52_137 | 159425 | 160801 | + | GH13_20 |
Gene ID: MGYG000003275_52_128
Type: TC
Location: 147853 - 148647 (-)
Type: TC
Location: 147853 - 148647 (-)
Gene ID: MGYG000003275_52_129
Type: TC
Location: 148640 - 149563 (-)
Type: TC
Location: 148640 - 149563 (-)
Gene ID: MGYG000003275_52_130
Type: TC
Location: 149768 - 150748 (-)
Type: TC
Location: 149768 - 150748 (-)
Gene ID: MGYG000003275_52_131
Type:
Location: 150909 - 151694 (-)
Type:
Location: 150909 - 151694 (-)
Gene ID: MGYG000003275_52_132
Type: pfam
Location: 151953 - 153356 (-)
Type: pfam
Location: 151953 - 153356 (-)
Gene ID: MGYG000003275_52_133
Type: TC
Location: 153539 - 154102 (-)
Type: TC
Location: 153539 - 154102 (-)
Gene ID: MGYG000003275_52_134
Type: peptidase
Location: 154346 - 155248 (+)
Type: peptidase
Location: 154346 - 155248 (+)
Gene ID: MGYG000003275_52_135
Type: TC
Location: 155593 - 157953 (+)
Type: TC
Location: 155593 - 157953 (+)
Gene ID: MGYG000003275_52_136
Type: TC
Location: 158075 - 159271 (+)
Type: TC
Location: 158075 - 159271 (+)
Gene ID: MGYG000003275_52_137
Type: CAZyme
Location: 159425 - 160801 (+)
Type: CAZyme
Location: 159425 - 160801 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp900762325
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.