Cluster: MGYG000003252_CGC86
🧬 Cluster Details
- Gene Count: 16
- CAZyme Count: 8
- Substrate:
- Genome ID: MGYG000003252
- CGC Family ID: CGCFAM_01476
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003252_341 | MGYG000003252_341_27 | 32745 | 34025 | - | CE12 |
| pfam | MGYG000003252_341 | MGYG000003252_341_28 | 34044 | 35669 | - | Mfa_like_1 |
| TF | MGYG000003252_341 | MGYG000003252_341_29 | 35795 | 40216 | - | HTH_AraC |
| CAZyme | MGYG000003252_341 | MGYG000003252_341_30 | 40431 | 42320 | + | PL11_1 |
| CAZyme | MGYG000003252_341 | MGYG000003252_341_31 | 42339 | 43319 | - | CE4 |
| TF | MGYG000003252_341 | MGYG000003252_341_32 | 43363 | 47646 | - | HTH_AraC |
| pfam | MGYG000003252_341 | MGYG000003252_341_33 | 47801 | 48115 | - | rhaM |
| CAZyme | MGYG000003252_341 | MGYG000003252_341_34 | 48139 | 49545 | - | GH105 |
| CAZyme | MGYG000003252_341 | MGYG000003252_341_35 | 49549 | 51390 | - | PL11_1 |
| CAZyme | MGYG000003252_341 | MGYG000003252_341_36 | 51624 | 52766 | + | GH105 |
| CAZyme | MGYG000003252_341 | MGYG000003252_341_37 | 52890 | 54524 | + | CE12 | CE12 |
| CAZyme | MGYG000003252_341 | MGYG000003252_341_38 | 55366 | 57474 | - | PL11_1 |
| TC | MGYG000003252_341 | MGYG000003252_341_39 | 57520 | 59253 | - | 8.A.46.1.3 |
| TC | MGYG000003252_341 | MGYG000003252_341_40 | 59274 | 62123 | - | 1.B.14.6.1 |
| pfam | MGYG000003252_341 | MGYG000003252_341_41 | 62175 | 64190 | - | SusD_RagB | SusD-like_3 |
| TC | MGYG000003252_341 | MGYG000003252_341_42 | 64213 | 67416 | - | 1.B.14.6.1 |
Gene ID: MGYG000003252_341_27
Type: CAZyme
Location: 32745 - 34025 (-)
Type: CAZyme
Location: 32745 - 34025 (-)
Gene ID: MGYG000003252_341_28
Type: pfam
Location: 34044 - 35669 (-)
Type: pfam
Location: 34044 - 35669 (-)
Gene ID: MGYG000003252_341_29
Type: TF
Location: 35795 - 40216 (-)
Type: TF
Location: 35795 - 40216 (-)
Gene ID: MGYG000003252_341_30
Type: CAZyme
Location: 40431 - 42320 (+)
Type: CAZyme
Location: 40431 - 42320 (+)
Gene ID: MGYG000003252_341_31
Type: CAZyme
Location: 42339 - 43319 (-)
Type: CAZyme
Location: 42339 - 43319 (-)
Gene ID: MGYG000003252_341_32
Type: TF
Location: 43363 - 47646 (-)
Type: TF
Location: 43363 - 47646 (-)
Gene ID: MGYG000003252_341_33
Type: pfam
Location: 47801 - 48115 (-)
Type: pfam
Location: 47801 - 48115 (-)
Gene ID: MGYG000003252_341_34
Type: CAZyme
Location: 48139 - 49545 (-)
Type: CAZyme
Location: 48139 - 49545 (-)
Gene ID: MGYG000003252_341_35
Type: CAZyme
Location: 49549 - 51390 (-)
Type: CAZyme
Location: 49549 - 51390 (-)
Gene ID: MGYG000003252_341_36
Type: CAZyme
Location: 51624 - 52766 (+)
Type: CAZyme
Location: 51624 - 52766 (+)
Gene ID: MGYG000003252_341_37
Type: CAZyme
Location: 52890 - 54524 (+)
Type: CAZyme
Location: 52890 - 54524 (+)
Gene ID: MGYG000003252_341_38
Type: CAZyme
Location: 55366 - 57474 (-)
Type: CAZyme
Location: 55366 - 57474 (-)
Gene ID: MGYG000003252_341_39
Type: TC
Location: 57520 - 59253 (-)
Type: TC
Location: 57520 - 59253 (-)
Gene ID: MGYG000003252_341_40
Type: TC
Location: 59274 - 62123 (-)
Type: TC
Location: 59274 - 62123 (-)
Gene ID: MGYG000003252_341_41
Type: pfam
Location: 62175 - 64190 (-)
Type: pfam
Location: 62175 - 64190 (-)
Gene ID: MGYG000003252_341_42
Type: TC
Location: 64213 - 67416 (-)
Type: TC
Location: 64213 - 67416 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides sp900761785
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000003252_341_31 | vegan > omnivore | 5.26760 | 0.00574 |
| MGYG000003252_341_31 | vegetarian > omnivore | 4.41455 | 0.00972 |