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Cluster: MGYG000003252_CGC80

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000003252_309 MGYG000003252_309_18 26263 29826 - 1.B.14.6.1
STP MGYG000003252_309 MGYG000003252_309_19 29920 31077 - FecR
TF MGYG000003252_309 MGYG000003252_309_20 31148 31699 - GerE
CAZyme MGYG000003252_309 MGYG000003252_309_21 32114 33610 - PL1_2
CAZyme MGYG000003252_309 MGYG000003252_309_22 33646 35313 - PL1_2
CAZyme MGYG000003252_309 MGYG000003252_309_23 35347 36921 - PL1_2
CAZyme MGYG000003252_309 MGYG000003252_309_24 37015 38658 - CE8
pfam MGYG000003252_309 MGYG000003252_309_25 38733 40619 - DUF5123
pfam MGYG000003252_309 MGYG000003252_309_26 40638 42542 - SusD_RagB | SusD-like_3
TC MGYG000003252_309 MGYG000003252_309_27 42568 45816 - 1.B.14.6.1
Gene ID: MGYG000003252_309_18
Type: TC
Location: 26263 - 29826 (-)
Gene ID: MGYG000003252_309_19
Type: STP
Location: 29920 - 31077 (-)
Gene ID: MGYG000003252_309_20
Type: TF
Location: 31148 - 31699 (-)
Gene ID: MGYG000003252_309_21
Type: CAZyme
Location: 32114 - 33610 (-)
Gene ID: MGYG000003252_309_22
Type: CAZyme
Location: 33646 - 35313 (-)
Gene ID: MGYG000003252_309_23
Type: CAZyme
Location: 35347 - 36921 (-)
Gene ID: MGYG000003252_309_24
Type: CAZyme
Location: 37015 - 38658 (-)
Gene ID: MGYG000003252_309_25
Type: pfam
Location: 38733 - 40619 (-)
Gene ID: MGYG000003252_309_26
Type: pfam
Location: 40638 - 42542 (-)
Gene ID: MGYG000003252_309_27
Type: TC
Location: 42568 - 45816 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000003252_309_26 vegan > omnivore 1.09518 0.00574
MGYG000003252_309_26 vegetarian > omnivore 1.36292 0.03811
MGYG000003252_309_27 vegetarian > omnivore 2.17175 0.01161

🧭 Explore Read Mapping of CGC

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