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Cluster: MGYG000003252_CGC79

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000003252_309 MGYG000003252_309_3 3019 3843 + 2.A.64.1.2
pfam MGYG000003252_309 MGYG000003252_309_4 3818 7294 + DEAD | ResIII | AAA_11 | AAA_11 | AAA_12 | AAA_19 | AAA_30
TC MGYG000003252_309 MGYG000003252_309_5 7688 9136 - 2.A.1.14.25
NULL(UNKNOWN) MGYG000003252_309 MGYG000003252_309_6 9220 9432 + NULL(UNKNOWN)
[View Structural Homologs]
pfam MGYG000003252_309 MGYG000003252_309_7 9454 10374 - KduI
TC MGYG000003252_309 MGYG000003252_309_8 10441 11847 - 4.A.5.1.4
CAZyme MGYG000003252_309 MGYG000003252_309_9 12150 13349 + GH105
CAZyme MGYG000003252_309 MGYG000003252_309_10 13386 14330 + CE8
CAZyme MGYG000003252_309 MGYG000003252_309_11 14779 16518 + CE12 | CE8
Gene ID: MGYG000003252_309_3
Type: TC
Location: 3019 - 3843 (+)
Gene ID: MGYG000003252_309_4
Type: pfam
Location: 3818 - 7294 (+)
Gene ID: MGYG000003252_309_5
Type: TC
Location: 7688 - 9136 (-)
Gene ID: MGYG000003252_309_6
Type:
Location: 9220 - 9432 (+)
Gene ID: MGYG000003252_309_7
Type: pfam
Location: 9454 - 10374 (-)
Gene ID: MGYG000003252_309_8
Type: TC
Location: 10441 - 11847 (-)
Gene ID: MGYG000003252_309_9
Type: CAZyme
Location: 12150 - 13349 (+)
Gene ID: MGYG000003252_309_10
Type: CAZyme
Location: 13386 - 14330 (+)
Gene ID: MGYG000003252_309_11
Type: CAZyme
Location: 14779 - 16518 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000003252_309_8 vegetarian > omnivore 1.30927 0.01161

🧭 Explore Read Mapping of CGC

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