Cluster: MGYG000003252_CGC51
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 9
- Substrate:
- Genome ID: MGYG000003252
- CGC Family ID: CGCFAM_00823
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003252_144 | MGYG000003252_144_30 | 38466 | 39695 | - | GH154 |
| CAZyme | MGYG000003252_144 | MGYG000003252_144_31 | 39879 | 42038 | - | PL8_3 |
| CAZyme | MGYG000003252_144 | MGYG000003252_144_32 | 42286 | 43413 | + | GH105 |
| CAZyme | MGYG000003252_144 | MGYG000003252_144_33 | 43503 | 44942 | - | GH29 |
| CAZyme | MGYG000003252_144 | MGYG000003252_144_34 | 44960 | 47338 | - | GH95 |
| TF | MGYG000003252_144 | MGYG000003252_144_35 | 47622 | 51632 | + | HTH_AraC |
| STP | MGYG000003252_144 | MGYG000003252_144_36 | 51858 | 52301 | + | AraC_binding |
| TC | MGYG000003252_144 | MGYG000003252_144_37 | 52458 | 55589 | + | 1.B.14.6.1 |
| pfam | MGYG000003252_144 | MGYG000003252_144_38 | 55605 | 57464 | + | SusD_RagB | SusD-like_3 |
| TC | MGYG000003252_144 | MGYG000003252_144_39 | 57483 | 60269 | + | 1.B.14.6.1 |
| pfam | MGYG000003252_144 | MGYG000003252_144_40 | 60281 | 61963 | + | SusD_RagB | SusD-like_3 |
| CAZyme | MGYG000003252_144 | MGYG000003252_144_41 | 62056 | 62958 | + | GH16_3 |
| CAZyme | MGYG000003252_144 | MGYG000003252_144_42 | 62987 | 64213 | + | GH88 |
| CAZyme | MGYG000003252_144 | MGYG000003252_144_43 | 64225 | 67626 | + | GH2 |
| CAZyme | MGYG000003252_144 | MGYG000003252_144_44 | 67639 | 69570 | + | PL33_1 |
Gene ID: MGYG000003252_144_30
Type: CAZyme
Location: 38466 - 39695 (-)
Type: CAZyme
Location: 38466 - 39695 (-)
Gene ID: MGYG000003252_144_31
Type: CAZyme
Location: 39879 - 42038 (-)
Type: CAZyme
Location: 39879 - 42038 (-)
Gene ID: MGYG000003252_144_32
Type: CAZyme
Location: 42286 - 43413 (+)
Type: CAZyme
Location: 42286 - 43413 (+)
Gene ID: MGYG000003252_144_33
Type: CAZyme
Location: 43503 - 44942 (-)
Type: CAZyme
Location: 43503 - 44942 (-)
Gene ID: MGYG000003252_144_34
Type: CAZyme
Location: 44960 - 47338 (-)
Type: CAZyme
Location: 44960 - 47338 (-)
Gene ID: MGYG000003252_144_35
Type: TF
Location: 47622 - 51632 (+)
Type: TF
Location: 47622 - 51632 (+)
Gene ID: MGYG000003252_144_36
Type: STP
Location: 51858 - 52301 (+)
Type: STP
Location: 51858 - 52301 (+)
Gene ID: MGYG000003252_144_37
Type: TC
Location: 52458 - 55589 (+)
Type: TC
Location: 52458 - 55589 (+)
Gene ID: MGYG000003252_144_38
Type: pfam
Location: 55605 - 57464 (+)
Type: pfam
Location: 55605 - 57464 (+)
Gene ID: MGYG000003252_144_39
Type: TC
Location: 57483 - 60269 (+)
Type: TC
Location: 57483 - 60269 (+)
Gene ID: MGYG000003252_144_40
Type: pfam
Location: 60281 - 61963 (+)
Type: pfam
Location: 60281 - 61963 (+)
Gene ID: MGYG000003252_144_41
Type: CAZyme
Location: 62056 - 62958 (+)
Type: CAZyme
Location: 62056 - 62958 (+)
Gene ID: MGYG000003252_144_42
Type: CAZyme
Location: 62987 - 64213 (+)
Type: CAZyme
Location: 62987 - 64213 (+)
Gene ID: MGYG000003252_144_43
Type: CAZyme
Location: 64225 - 67626 (+)
Type: CAZyme
Location: 64225 - 67626 (+)
Gene ID: MGYG000003252_144_44
Type: CAZyme
Location: 67639 - 69570 (+)
Type: CAZyme
Location: 67639 - 69570 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides sp900761785
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000003252_144_40 | vegan > omnivore | 14.25127 | 0.00574 |
| MGYG000003252_144_40 | vegetarian > omnivore | 14.30265 | 0.00972 |